Faculty of Medicine and Health Technology

Research output

Research output per year 1996 2019 2020 2021 2022 2023 2024 2024

• 5688 Article
• 735 Conference contribution
• 478 Review Article
• 430 Chapter
• 1052 More
  • 355 Doctoral thesis
  • 182 Abstract
  • 126 Comment/debate
  • 100 Editorial
  • 85 Letter
  • 46 Meeting Abstract
  • 28 Anthology
  • 25 Poster
  • 21 Commissioned report
  • 18 Other conference contribution
  • 14 Patent
  • 11 Special issue
  • 7 Book
  • 7 Digital or Visual Products
  • 6 Data article
  • 6 Other contribution
  • 3 Other online publication
  • 3 Preprint
  • 2 Licentiate thesis
  • 2 Master's thesis
  • 2 Conference article
  • 1 Foreword/postscript
  • 1 Web publication/site
  • 1 Working paper

Research output per year

Research output per year

Search results

• 2013

  Modeling of superbursts in neuronal cultures: Which synaptic and cellular mechanisms are required?

  Mäki-Marttunen, T. M., Acimovic, J., Ruohonen, K. P. & Linne, M.-L., 9 Nov 2013, Neuroscience 2013; 43rd Annual Meeting, New Orleans, USA, November, 9-13, 2013. 678.06/MMM17

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

  Open Access

  • Cellular Mechanisms 100%
  • Neuronal Culture 100%
  • Synaptic Mechanisms 100%
  • Superoutburst 100%
  • Leaky Integrate-and-fire Model 100%

• On the effect of network structure and synaptic mechanisms on sustained bursting activity

  Mäki-Marttunen, T. M., Acimovic, J., Ruohonen, K. P. & Linne, M.-L., 8 Jul 2013, Twenty Second Annual Computational Neuroscience Meeting: CNS*2013. Cymbalyuk, G. & Prinz, A. (eds.). Paris, France: BioMed Central, Vol. Volume 14 Suppl 1. p. P247 1 p.

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

  Open Access

  • Network Structure 100%
  • Burst Effect 100%
  • Synaptic Mechanisms 100%
  • Excitability 100%
  • Membrane Potential 100%

• Study of the kinetics of transcription as a function of the cell growth phase

  Sala, A., Sanches Ribeiro, A. & Kandhavelu, M., 1 Jul 2013, FEBS journal. p. 570-570

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Undercut edges for robust capillary self-alignment in hybrid microassembly

  Liimatainen, V., Sariola, V. & Zhou, Q., 2013, 8th Annual IEEE International Conference on Nano/Micro Engineered and Molecular Systems, IEEE NEMS 2013. p. 1088-1091 4 p. 6559911

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

  • Capillary Self-alignment 100%
  • Hybrid Microassembly 100%
  • Chemical Treatment 100%
  • Pattern Matching 100%
  • Low Surface Tension 100%
  4 Citations (Scopus)

• Wearable and implantable antennas for wireless body-centric sensing systems

  Björninen, T., Moradi, E., Koski, K., Sydänheimo, L., Ukkonen, L., Muller, R., Ledochowitsch, P., Rabaey, J. M. & Rahmat-Samii, Y., 29 Oct 2013, BODYNETS 2013 - 8th International Conference on Body Area Networks. ICST, p. 288 1 p.

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

  • Wireless 100%
  • Wearable Antenna 100%
  • Sensing System 100%
  • Implantable Antenna 100%
  • Body-centric 100%
• 2012

  Algorithm for In Silico Optimization of Production Strains

  Heikkinen, E., Larjo, A., Santala, V., Yli-Harja, O. & Aho, T., 2012, Proceedings of Ninth International Workshop on Computational Systems Biology, WCSB 2012, 4-6 June, Ulm, Germany. TICSP Series. Larjo, A., Schober, S., Farhan, M., Bossert, M. & Yli-Harja, O. (eds.). Tampere: Tampere University of Technology, p. 1-4 4 p. (International Workshop on Computational Systems Biology; vol. 61).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Application Independent Greedy Particle Tracking Method for 3D Fluorescence Microscopy Image Series

  Paavolainen, L., Kankaanpää, P., Ruusuvuori, P., McNerney, G., Karjalainen, M. & Marjomäki, V., 2012, 9th IEEE International Symposium on Biomedical Imaging, ISBI 2012, May 2-5, 2012, Barcelona, Spain. Piscataway, NJ: Institute of Electrical and Electronics Engineers IEEE, p. 672-675 (IEEE International Symposium on Biomedical Imaging).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
  8 Citations (Scopus)

• Contribution of amyloid beta to intracellular calcium signals in astrocytes: a computational study

  Toivari, E., Holm, K., Manninen, T., Jalonen, T. O. & Linne, M.-L., 2012, The 42nd Annual Meeting of the Society for Neuroscience, SFN 2012, New Orleans, LA, USA, 13-17 October 2012. 1 p.

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Expressive Statistical Model Checking of Genetic Networks with Delayed Stochastic Dynamics

  Ballarini, P., Mäkelä, J. P. & Sanches Ribeiro, A., 2012, Computational Methods in Systems Biology. Proceedings of 10th International Conference, CMSB 2012, London, UK, October 3-5, 2012. Lecture Notes in Computer Science. Heidelberg: Springer, p. 29-48 (International Conference on Computational Methods in Systems Biology; vol. 7605).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
  5 Citations (Scopus)

• In silico study on structure and dynamics in bursting neuronal networks

  Mäki-Marttunen, T. M., Acimovic, J., Ruohonen, K. P. & Linne, M.-L., 13 Oct 2012, Neuroscience 2012; 42nd Annual Meeting, New Orleans, USA, October 14-18, 2012. Society for Neuroscience (SfN), 1 p. 300.26/DDD70

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

  Open Access

  • Network Activity 100%
  • Neuronal Network 100%
  • In Silico Study 100%
  • In Vivo 100%
  • In Vitro 100%

• In Vivo Kinetics of Asymmetric Disposal of Individual Protein Aggregates in E.Coli, One Aggregate at a Time

  Ribeiro, A. S., Lloyd-Price, J., Häkkinen, A., Kandhavelu, M., Marques, I. J., Chowdhury, S., Lihavainen, E. & Yli-Harja, O., 2012, Proceedings of Ninth International Workshop on Computational Systems Biology, WCSB 2012, 4-6 June, Ulm, Germany. TICSP Series. Larjo, A., Schober, S., Farhan, M., Bossert, M. & Yli-Harja, O. (eds.). Tampere: Tampere University of Technology, p. 1-4 4 p. (International Workshop on Computational Systems Biology; vol. 61).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Morphological properties of neurons affect statistics of neuronal network connectivity leading to functionally different network types

  Acimovic, J., Mäki-Marttunen, T. M. & Linne, M.-L., 13 Oct 2012, Neuroscience 2012; 42nd Annual Meeting, New Orleans, USA, October 14-18, 2012. Society for Neuroscience, 539.02/D20

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

  Open Access

  • Neuronal Network 100%
  • Network Type 100%
  • Morphological Properties 100%
  • Neurite 100%
  • Network Connectivity 100%

• Quantifying the Relationship Between the Structure and the Dynamics of Random Boolean Networks from Time Series Data

  Sarbu, S., Kesseli, J. & Nykter, M., 2012, Proceedings of Ninth International Workshop on Computational Systems Biology, WCSB 2012, 4-6 June, Ulm, Germany. TICSP Series. Larjo, A., Schober, S., Farhan, M., Bossert, M. & Yli-Harja, O. (eds.). Tampere: Tampere International Center for Signal Processing, p. 75-78 4 p. (TICSP Series; no. 61).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Sequence Dependent Properties of the Expression Dynamics of Genes and Gene Networks

  Potapov, I., Mäkelä, J., Yli-Harja, O. & Ribeiro, A. S., 2012, Computational Methods in Systems Biology. Proceedings of 10th International Conference, CMSB 2012, London, UK, October 3-5, 2012. Lecture Notes in Computer Science. David, G. & Monika, H. (eds.). Heidelberg: Springer, p. 307-321 (International Conference on Computational Methods in Systems Biology; vol. 7605).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Significance of graph theoretic measures in predicting neuronal network activity

  Mäki-Marttunen, T. M., Acimovic, J., Ruohonen, K. P. & Linne, M.-L., 23 Feb 2012, Proceedings of The 9th annual Computational and Systems Neuroscience meeting (COSYNE 2012). Salt Lake City, p. 55-55 1 p. I-15

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

  Open Access

  • Long-term Depression 100%
  • Network Structure 100%
  • Burst Size 100%
  • Clustering Coefficient 100%
  • Graph-theoretic Measures 100%

• Stochastic model of transcription initiation of closely spaced promoters in Escherichia coli

  Martins, L., Mäkelä, J., Häkkinen, A., Ribeiro, A. S. & Fonseca, J. M., 2012, Proceedings of the Ninth International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics, CIBB- 2012, July 12 - 14, 2012, Houston Texas, US. p. 1-10 10 p. (International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• The Eighth Annual MLSP Competition: Second Place Team

  Huttunen, H., Erkkilä, T., Ruusuvuori, P. & Manninen, T., 2012, IEEE International Workshop on Machine Learning for Signal Processing, 23 - 26 September 2012, Santander, Spain. Santamaria, I., ArenasGarcia, J., CampsValls, G., Erdogmus, D., PerezCruz, F. & Larsen, J. (eds.). Piscataway, NJ: Institute of Electrical and Electronics Engineers IEEE, p. 1-2 2 p. (IEEE International Workshop on Machine Learning for Signal Processing).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Towards new model of neuronal growth: Comparison of models and tools for neuronal growth in vitro

  Havela, R., Acimovic, J. & Linne, M.-L., 10 Sept 2012, Neuroinformatics 2012, 5th INCF Congress. Bjaalle, J., Herz, A., Hill, S. & Wachtler, T. (eds.). Munich, Germany: International Neuroinformatics Coordinating Facility, p. 100-100 1 p. P027

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

  Open Access

  • Neuronal Network 100%
  • Model Comparison 100%
  • Neuronal Growth 100%
  • Growth in Vitro 100%
  • Growth Comparison 100%
• 2011

  AMPA, NMDA and GABAa Receptor mediated Network Burst Dynamics in Cortical Cultures in Vitro

  Teppola, H., Okujeni, S., Linne, M.-L. & Egert, U., 2011, Eight International Workshop on Computational Systems Biology, WCSB 2011, June 6-8, Zurich, Switzerland. TICSP series. Koeppl, H., Acimovic, J., Kesseli, J., Mäki-Marttunen, T., Larjo, A. & Yli-Harja, O. (eds.). Zurich: WCSB 2011, p. 181-184 (International Workshop on Computational Systems Biology WCSB; no. 57).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• An interacting multiple model filter based autofocus strategy for confocal microscope in time- lapse imaging

  Chowdhury, S., 2011, Digest of TISE Seminar 2011. TISE publications. Niemistö, A. (ed.). Tampere: Tampere Graduate School in Information Science and Engineering (TISE). Tampere University of Technology, p. 99-104 6 p. (TISE Seminar; vol. 10).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific

• Computational study of structural changes in neuronal networks during growth: a model of dissociated neocortical cultures

  Acimovic, J., Mäki-Marttunen, T. & Linne, M.-L., 2011, Twentieth Annual Computational Neuroscience Meeting: CNS*2011. Fellous, J.-M. & Prinz, A. (eds.). Stockholm: BioMed Central, Vol. 12 (Suppl 1). p. P203 1 p. P203. (Annual Computational Neuroscience Meeting CNS; vol. 12).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

  • Structural Change 100%
  • Neuronal Network 100%
  • Computational Study 100%
  • Cortical Culture 100%
  • Neurite 100%

• Concordance Between Pathway Databases and Refinement of Pathways for Computational Analysis

  Levo, T., Ylipää, A. & Nykter, M., 2011, Eight International Workshop on Computational Systems Biology, WCSB 2011, June 6-8, Zurich, Switzerland. TICSP series. Koeppl, H., Acimovic, J., Kesseli, J., Mäki-Marttunen, T., Larjo, A. & Yli-Harja, O. (eds.). Zurich: WCSB 2011, p. 113-116 (International Workshop on Computational Systems Biology WCSB; no. 57).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Correcting Cell Tracking Errors Using Adaptive Re-Segmentation and Coupled Flow

  Hayrapetyan, N., Ruusuvuori, P., Shmulevich, I., Blake, N., Ozinsky, A. & Flann, N., 2011, Eight International Workshop on Computational Systems Biology, WCSB 2011, June 6-8, Zurich, Switzerland. TICSP series. Koeppl, H., Acimovic, J., Kesseli, J., Mäki-Marttunen, T., Larjo, A. & Yli-Harja, O. (eds.). Zurich: WCSB 2011, p. 65-68 (International Workshop on Computational Systems Biology WCSB; no. 57).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Cross-species comparision of STAT6 transcription regulation in mice and humans

  Laurila, K., 2011, Digest of TISE Seminar 2011. TISE publications. Niemistö, A. (ed.). Tampere: Tampere Graduate School in Information Science and Engineering (TISE). Tampere University of Technology, p. 89- 94 (TISE Seminar; vol. 10).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific

• Dynamics of a Genetic Switch at the Nucleotide and Codon Levels

  Potapov, I., Lloyd-Price, J., Yli-Harja, O. & Ribeiro, A. S., 2011, Eight International Workshop on Computational Systems Biology, WCSB 2011, June 6-8, Zurich, Switzerland. TICSP series. Koeppl, H., Acimovic, J., Kesseli, J., Mäki-Marttunen, T., Larjo, A. & Yli-Harja, O. (eds.). Zurich: WCSB 2011, p. 153-156 (International Workshop on Computational Systems Biology WCSB; no. 57).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Dynamics of Gene Expression under Tetracycline Inducible Promoters

  Smolander, O.-P., Kandhavelu, M., Mannerström, H., Lihavainen, E., Kalaichelvan, S., Healy, S., Yli-Harja, O., Karp, M. & Ribeiro, A. S., 2011, Eight International Workshop on Computational Systems Biology, WCSB 2011, June 6-8, Zurich, Switzerland. TICSP series. Koeppl, H., Acimovic, J., Kesseli, J., Mäki-Marttunen, T., Larjo, A. & Yli-Harja, O. (eds.). Zurich: WCSB 2011, p. 227-227 (International Workshop on Computational Systems Biology WCSB; no. 57).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Effect of lactide monomer on the hydrolytic degradation and performance of melt processed poly(lactide-coglycolide) 85L/15G

  Paakinaho, K., Heino, H., Väisänen, J., Törmälä, P. & Kellomäki, M., 2011, 24th European Conference on Biomaterials - Annual Conference of the European Society for Biomaterials, ESB 2011.

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Effects of local structure of neuronal networks on spiking activity in silico

  Mäki-Marttunen, T. M., Acimovic, J., Ruohonen, K. P. & Linne, M.-L., 18 Jul 2011, Twentieth Annual Computational Neuroscience Meeting: CNS*2011. Fellous, J.-M. & Prinz, A. (eds.). Stockholm: BioMed Central, Vol. 12 (Suppl 1). p. P202 1 p.

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

  Open Access

  • Neuronal Network 100%
  • In Silico 100%
  • Spiking Activity 100%
  • Local Structure 100%
  • Dynamics 100%

• Effects of structure on spontaneous activity in simulated neuronal networks

  Mäki-Marttunen, T., Acimovic, J., Ruohonen, K. & Linne, M.-L., 11 Apr 2011, Proceedings of Mathematical Neuroscience (ICMS 2011), April 11-13, 2011, Edinburgh, Scotland.

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Emergence of global and local structural features during development of neuronal networks

  Acimovic, J., 6 Jun 2011, Proceedings of the Eighth International Workshop on Computational Systems Biology, WCSB 2011, June 6-8, 2011, Zürich, Switzerland . Tampere: TICSP, (TICSP Series ; vol. 57).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

  Open Access

• Low-profile conformal UHF RFID tag antenna for identification of water bottles

  Björninen, T., May 2011, Digest of TISE Seminar 2012, Nokia, Finland, 14 June, 2012. Niemistö, A. (ed.). p. 59-64

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific

• Of the Complexity of Boolean Network State Trajectories

  Mäki-Marttunen, T., Kesseli, J., Kauffman, S., Yli-Harja, O. & Nykter, M., 2011, Eight International Workshop on Computational Systems Biology, WCSB 2011, June 6-8, Zurich, Switzerland. TICSP series. Koeppl, H., Acimovic, J., Kesseli, J., Mäki-Marttunen, T., Larjo, A. & Yli-Harja, O. (eds.). Zurich: WCSB 2011, p. 137-140 (International Workshop on Computational Systems Biology WCSB; no. 57).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

  File

  • Boolean Networks 100%
  • Network State 100%
  • State Trajectory 100%
  • Boolean Network 100%
  • Probabilistic Boolean Networks 50%
  43 Downloads (Pure)

• Studying the quality of noise in a large biochemical reaction network as a function of the system volume

  Intosalmi, J., Manninen, T., Ruohonen, K. & Linne, M.-L., 2011, The International Conference on Applied Mathematics, Modeling and Computational Science, AMMCS 2011, 25 - 29 July, Waterloo, Ontario, Canada. Waterloo, Ontario, Canada: AMMCS 2011, p. 409 (International Conference on Applied Mathematics, Modeling and Computational Science AMMCS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific

• The role of fast inhibition in AMPA and NMDA receptor mediated network burst dynamics in cortical cultures

  Teppola, H., Okujeni, S., Linne, M.-L. & Egert, U., 4 Oct 2011, Front. Comput. Neurosci. Conference Abstract: BC11 : Computational Neuroscience & Neurotechnology Bernstein Conference & Neurex Annual Meeting 2011.

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

  Open Access
• 2010

  An improved clump splitting method for convex objects

  Farhan, M., Yli-Harja, O. & Niemistö, A., 2010, Proceedings of the Seventh International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, 16-18 June 2010. Nykter, M., Ruusuvuori, P., Carlberg, C. & Yli-Harja, O. (eds.). p. 35-38

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Classifier design with pathway based feature selection

  Kivinen, V., Nykter, M., Yli-Harja, O. & Shmulevich, I., 2010, Proceedings of the Seventh International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, June 16-18, 2010. TICSP Series. Nykter, M., Ruusuvuori, P., Carlberg, C. & Yli-Harja, O. (eds.). p. 4 p

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Comparing two stochastic differential equation models for protein kinase C activation pathway

  Intosalmi, J., Manninen, T., Ruohonen, K. & Linne, M.-L., 2010, Abstracts of Papers, Posters and Talks presented at the 2010 Joint RECOMB Satellite Conference on Systems Biology - Regulatory Genomics - DREAM5, New York, USA, 16-20 November 2010. p. 139

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Comparison of discrete- and continuous-state stochastic methods to model neuronal signal transduction

  Manninen, T. & Keller, D. X., 2010, Proceedings of ACM International Conference on Bioinformatics and Computational Biology BCB10, Niagara Falls, New York, USA, August 2-4, 2010. p. 394-397

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
  1 Citation (Scopus)

• Comparison of four publicly available ChIP-seq alignment tools

  Seppälä, J., Yli-Harja, O. & Autio, R., 2010, Proceedings of the Seventh International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, June 16-18, 2010. TICSP Series. Nykter, M., Ruusuvuori, P., Carlberg, C. & Yli-Harja, O. (eds.). p. 4 p

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Computational modeling of growth in cortial cultures using the NETMORPH simulation tool

  Acimovic, J., Mäki-Marttunen, T. & Linne, M.-L., 2010, Neuroscience 2010, 40th Annual Meeting, San Diego, USA, 13-17 November 2010. p. 2 p

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

  Open Access

  • Synapse 100%
  • Computational Modeling 100%
  • Growth Modeling 100%
  • In Vitro 100%
  • Cortical Culture 75%

• Computational models for synaptic plasticity

  Manninen, T., 2010, 3rd INCF National Node of Finland Workshop on Neuroinformatics, Tampere, Finland, 21 September 2010. 1 p.

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific

• Construction of a computational data analysis pipeline using a workflow system

  Aho, K.-L., Kerkelä, E., Yli-Harja, O. & Roos, C., 2010, Proceedings of the Seventh International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, June 16-18, 2010. TICSP Series. Nykter, M., Ruusuvuori, P., Carlberg, C. & Yli-Harja, O. (eds.). p. 4 p

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

  File

  • Computational Data Analysis 100%
  • Workflow Systems 100%
  • Data Analysis pipeline 100%
  • Workflow System 100%
  • Integrative Analysis 33%
  62 Downloads (Pure)

• Dynamical effect of transcriptional pause sites

  Ribeiro, A. S., Häkkinen, A., Healy, S., Rajala, T. & Yli-Harja, O., 2010, Proceedings of the Seventh International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, June 16-18, 2010. TICSP Series. Nykter, M., Ruusuvuori, P., Carlberg, C. & Yli-Harja, O. (eds.). p. 3 p

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• e-Health ohjelmistot ja uuden lääkelaitedirektiivin vaikutukset

  Translated title of the contribution: e-Health ohjelmistot ja uuden lääkelaitedirektiivin vaikutuksetVärri, A., 2010, The 15th Finnish National conference on Telemedicine and eHealth, MS Viking Mariella, Helsinki - Stockholm, 8-10 April 2010. p. 65-66

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific

• Evaluation of methods for detection of subcellular components in microscope images

  Chowdhury, S., 2010, Digest of TISE Seminar 2010, Ylöjärvi, Finland, 26.5.2010. TISE Publications. Koivisto, P. (ed.). p. 119-124

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific

• From genetic markers to characteristic regulators in soft-tissue sarcomas

  Ylipää, A., Yli-Harja, O., Zhang, W. & Nykter, M., 2010, Proceedings of the Seventh International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, June 16-18, 2010. TICSP Series. Nykter, M., Ruusuvuori, P., Carlberg, C. & Yli-Harja, O. (eds.). p. 4

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Identification of Genes Involved In the Differentation Process from Human Embryonic Stem Cells to Neural Progenitor Cells

  Kong, L., Rautajoki, K., Yli-Harja, O. & Autio, R., 2010, Proceedings of the Seventh International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, June 16-18, 2010. TICSP Series. Nykter, M., Ruusuvuori, P., Carlberg, C. & Yli-Harja, O. (eds.). p. 1 p

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Identity verification based on vessel matching from fundus images

  Oinonen, H., Forsvik, H., Ruusuvuori, P., Yli-Harja, O., Voipio, V. & Huttunen, H., 2010, Proceedings of the 17th IEEE International Conference on Image Processing ICIP, Hong Kong, September 26-29, 2010. p. 4089-4092

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
  34 Citations (Scopus)

• Image-based phenotyping of complex yeast strains

  Ruusuvuori, P., Scott, A., Garmendia-Torres, C., Dudley, A. & Shmulevich, I., 2010, Proceedings of the Seventh International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, June 16-18, 2010. TICSP Series. Nykter, M., Ruusuvuori, P., Carlberg, C. & Yli-Harja, O. (eds.). p. 145

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review

• Improving correlation between microarrays and transcriptome sequencing through probe set analysis

  Annala, M., Yli-Harja, O., Shmulevich, I. & Nykter, M., 2010, Proceedings of the Seventh International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, June 16-18, 2010. TICSP Series. Nykter, M., Ruusuvuori, P., Carlberg, C. & Yli-Harja, O. (eds.). p. 4 p

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review