Research output per year
Research output per year
Personal profile
Title of docent at TUT
TkT. Signaalinkäsittelyn laitos. 2013 - 2018.
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
Education/Academic qualification
Doctor of Science (Technology), Information Technology
Award Date: 11 Dec 2006
Master of Science (Technology)
Award Date: 31 Mar 2002
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Dive into the research topics where Matti Nykter is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Adaptive and non-adaptive gene expression responses in prostate cancer during androgen deprivation
Nätkin, R., Pennanen, P., Syvälä, H., Bläuer, M., Kesseli, J., Tammela, T. L. J., Nykter, M. & Murtola, T. J., Feb 2023, In: PLoS ONE. 18, 2 February, 24 p., e0281645.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile1 Downloads (Pure) -
Cancer origin tracing and timing in two high-risk prostate cancers using multisample whole genome analysis: prospects for personalized medicine
Nurminen, A., Jaatinen, S., Taavitsainen, S., Högnäs, G., Lesluyes, T., Ansari-Pour, N., Tolonen, T., Haase, K., Koskenalho, A., Kankainen, M., Jasu, J., Rauhala, H., Kesäniemi, J., Nikupaavola, T., Kujala, P., Rinta-Kiikka, I., Riikonen, J., Kaipia, A., Murtola, T., Tammela, T. L., & 5 others, Oct 2023, In: Genome Medicine. 15, 15 p., 82.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Characterization of the innate immune response to Streptococcus pneumoniae infection in zebrafish
Saralahti, A. K., Harjula, S. K. E., Rantapero, T., Uusi-Mäkelä, M. I. E., Kaasinen, M., Junno, M., Piippo, H., Nykter, M., Lohi, O., Rounioja, S., Parikka, M. & Rämet, M., 9 Jan 2023, In: PLOS GENETICS. 19, 1, 32 p., e1010586.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile4 Downloads (Pure) -
Distinct transcriptomic profiles in children prior to the appearance of type 1 diabetes-linked islet autoantibodies and following enterovirus infection
Lin, J., Moradi, E., Salenius, K., Lehtipuro, S., Häkkinen, T., Laiho, J. E., Oikarinen, S., Randelin, S., Parikh, H. M., Krischer, J. P., Toppari, J., Lernmark, Å., Petrosino, J. F., Ajami, N. J., She, J-X., Hagopian, W. A., Rewers, M. J., Lloyd, R. E., Rautajoki, K. J., Hyöty, H., & 2 others, 22 Nov 2023, In: Nature Communications. 14, 1, 13 p., 7630.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Early-onset grade 2-3 diffuse gliomas and schwannomas increase the risk of central nervous system tumors among the patients' relatives
Alanen, E., Heikkinen, S., Nurminen, R., Nykter, M., Haapasalo, H., Hirvonen, E., Pitkäniemi, J. & Rautajoki, K. J., Feb 2023, In: Neuro-Oncology Advances. 5, 1, 10 p., vdad008.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile
Datasets
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The transcription factor network of E. coli steers global responses to shifts in RNAP concentration
Lima de Brito Almeida, B. (Creator), Mohamed Bahrudeen, M. (Creator), Chauhan, V. (Creator), Dash, S. (Creator), Kandavalli, V. (Creator), Häkkinen, A. (Creator), Lloyd-Price, J. (Creator), Santos Dias Palma, C. (Creator), Calado Baptista, I. (Creator), Gupta, A. (Creator), Kesseli, J. (Creator), Dufour, E. (Creator), Smolander, O. (Creator), Nykter, M. (Creator), Auvinen, P. (Creator), Jacobs, H. (Creator), M.D. Oliveira, S. (Creator) & Sanches Ribeiro, A. (Creator), 15 Jul 2022
DOI: 10.5061/dryad.wh70rxwnp, https://zenodo.org/record/6841560
Dataset
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Comparison of iTRAQ and SWATH in a clinical study with multiple time points
Jylhä, A. (Creator), Nättinen, J. (Creator), Aapola, U. (Creator), Mikhailova, A. (Creator), Nykter, M. (Creator), Zhou, L. (Creator), Beuerman, R. (Creator) & Uusitalo, H. (Creator), 30 Jul 2018
DOI: 10.6084/m9.figshare.c.4182785.v1
Dataset
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MOESM1 of Comparison of iTRAQ and SWATH in a clinical study with multiple time points
Jylhä, A. (Contributor), Nättinen, J. (Contributor), Aapola, U. (Creator), Mikhailova, A. (Creator), Nykter, M. (Creator), Zhou, L. (Creator), Beuerman, R. (Creator) & Uusitalo, H. (Creator), 30 Jul 2018
DOI: 10.6084/m9.figshare.6880190.v1
Dataset
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MOESM2 of Comparison of iTRAQ and SWATH in a clinical study with multiple time points
Jylhä, A. (Contributor), Nättinen, J. (Contributor), Aapola, U. (Creator), Mikhailova, A. (Creator), Nykter, M. (Creator), Zhou, L. (Creator), Beuerman, R. (Creator) & Uusitalo, H. (Creator), 30 Jul 2018
DOI: 10.6084/m9.figshare.6880205.v1
Dataset
Activities
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3D histology based on serial sectioning and computational reconstruction
Kimmo Kartasalo (Speaker), Leena Latonen (Speaker), Matti Nykter (Speaker), Pekka Ruusuvuori (Speaker), Masi Valkonen (Speaker) & Tapio Visakorpi (Speaker)
1 Jun 2018Activity: Talk or presentation › Conference presentation
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Integrative analysis of the proteome in prostate cancer uncovers robustness against genomic and transcriptomic aberrations during disease progression
Teuvo Tammela (Contributor), Ulla Aapola (Contributor), Afyounian Ebrahim (Contributor), Matti Annala (Contributor), Antti Jylhä (Contributor), Leena Latonen (Contributor), Matti Nykter (Contributor), Janika Nättinen (Contributor), Hannu Uusitalo (Contributor) & Tapio Visakorpi (Contributor)
16 Mar 2018Activity: Talk or presentation › Conference presentation
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3D reconstruction and machine learning based analysis of prostate cancer from histological images
P Ruusuvuori (Contributor), M Valkonen (Contributor), K Kartasalo (Contributor), T Visakorpi (Contributor), M Nykter (Contributor) & L. Latonen (Contributor)
2 Dec 2017Activity: Talk or presentation › Conference presentation
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Chromatin state alterations in human prostate cancer progression
Joonas Tuominen (Contributor), Matti Annala (Contributor), Kirsi Granberg (Contributor), Tomi Häkkinen (Contributor), Kati Kivinummi (Contributor), Leena Latonen (Contributor), Matti Nykter (Contributor), Teuvo Tammela (Contributor) & Tapio Visakorpi (Contributor)
2 Dec 2017Activity: Talk or presentation › Conference presentation
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Integrative analysis of the proteome in primary and advanced prostate cancer
Leena Latonen (Contributor), Ulla Aapola (Contributor), Afyounian Ebrahim (Contributor), Matti Annala (Contributor), Antti Jylhä (Contributor), Kati Kivinummi (Contributor), Matti Nykter (Contributor), Janika Nättinen (Contributor), Teuvo Tammela (Contributor), Hannu Uusitalo (Contributor) & Tapio Visakorpi (Contributor)
2 Dec 2017Activity: Talk or presentation › Conference presentation