Research output per year
Research output per year
Personal profile
Associate professor
TkT. Signaalinkäsittelyn laitos. 2013 - 2018.
Education/Academic qualification
Doctor of Science (Technology), Information Technology
Award Date: 11 Dec 2006
Master of Science (Technology)
Award Date: 31 Mar 2002
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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SDG 3 Good Health and Well-being -
SDG 13 Climate Action
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Dive into the research topics where Matti Nykter is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Deep Invaginations of Nuclear Envelope Coordinate Spatial Organization of Chromatin in Epithelium
Mäntylä, E., Korpela, S., Rekonen, A., Hakkola, S., Karttunen, J., Pörsti, A., Erämies, S., Martins, F. T. A., Davidsson, R., Ojanen, M. J. T., Hakanen, S.A.-M., Wang, P., Uusi-Mäkelä, J., Varlet, A. A., Vihinen-Ranta, M., Conway, D. E., Viiri, K., Nykter, M., Lammerding, J. & Ihalainen, T. O., 12 Mar 2026, bioRxiv.Research output: Working paper › Preprint › Scientific
Open Access -
Genomic analysis of PLNTY-like tumor progression into epithelioid glioblastoma: a case report
Mäntylä, S., Nurminen, A., Huovinen, S., Jaatinen, S., Haapaniemi, T., Nurminen, R., Hermelo, I., Volz, S., Maaß, K. K., Pajtler, K. W., Nordfors, K., Haapasalo, H., Nykter, M., Haapasalo, J. & Rautajoki, K. J., 2026, In: Acta Neuropathologica Communications. 14, 1, 14 p., 35.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile2 Downloads (Pure) -
Repertoire and clinical hierarchy of AR locus alterations in castration-resistant prostate cancer
Virtanen, T., Kwan, E. M., Parekh, K., Bacon, J. V. W., Huang, C. F., Yu, I. P. L., Ryyppö, L., Bernales, C. Q., Donnellan, G., Tam, C., Sipola, J., Nikkola, J., Vandekerkhove, G., Tolmeijer, S. H., Kukkonen, K., Adelia, Eigl, B. J., Finch, D., Gagnon, R. & Takieldeen, Y. & 37 others, , Mar 2026, In: Annals of Oncology. 37, 3, p. 388-402 15 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile4 Citations (Scopus)5 Downloads (Pure) -
Celiac and non-celiac iPSC-derived small intestinal epithelial cells evince cell-type specific response to inflammatory cytokine stimulations
Kukkoaho, P., Annala, M., Tanner, K., Siddique, F., Kaunisto, H., Kandikanti, N., Kesseli, J., Leskinen, K., Saavalainen, P., Nykter, M., Aalto-Setälä, K., Kaukinen, K., Lindfors, K. & Juuti-Uusitalo, K., 12 Sept 2025.Research output: Other conference contribution › Poster › Scientific
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Comprehensive Genomic Profiling in Advanced Non-Small Cell Lung Cancer: A Real-World Cohort Study in Finland
Hormalainen, K., Marttila, K., Nykter, M., Uibu, T., Ahvonen, J., Fey, V., Keinänen, M., Bärlund, M. & Jukkola, A., Oct 2025, In: Cancer Medicine. 14, 19, 10 p., e71250.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile3 Downloads (Pure)
Datasets
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MOESM1 of Comparison of iTRAQ and SWATH in a clinical study with multiple time points
Jylhä, A. (Contributor), Nättinen, J. (Contributor), Aapola, U. (Creator), Mikhailova, A. (Creator), Nykter, M. (Creator), Zhou, L. (Creator), Beuerman, R. (Creator) & Uusitalo, H. (Creator), figshare, 30 Jul 2018
DOI: 10.6084/m9.figshare.6880190.v1
Dataset
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LncRNAs and their sequences from "Tumor-associated long non-coding RNAs show variable expression across diffuse gliomas and effect on cell growth upon silencing in glioblastoma"
Uusi-Mäkelä, J. I. (Creator), Kauppinen, M. (Creator), Seppälä, J. M. (Creator), Jaatinen, S. (Creator), Ryback, B. (Creator), Rantapero, T. (Creator), Rodriguez Martinez, A. (Creator), Nykter, M. (Creator) & Rautajoki, K. J. (Creator), Zenodo, 25 Feb 2026
Dataset
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Comparison of iTRAQ and SWATH in a clinical study with multiple time points
Jylhä, A. (Creator), Nättinen, J. (Creator), Aapola, U. (Creator), Mikhailova, A. (Creator), Nykter, M. (Creator), Zhou, L. (Creator), Beuerman, R. (Creator) & Uusitalo, H. (Creator), figshare, 30 Jul 2018
DOI: 10.6084/m9.figshare.c.4182785.v1
Dataset
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MOESM2 of Comparison of iTRAQ and SWATH in a clinical study with multiple time points
Jylhä, A. (Contributor), Nättinen, J. (Contributor), Aapola, U. (Creator), Mikhailova, A. (Creator), Nykter, M. (Creator), Zhou, L. (Creator), Beuerman, R. (Creator) & Uusitalo, H. (Creator), figshare, 30 Jul 2018
DOI: 10.6084/m9.figshare.6880205.v1
Dataset
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The transcription factor network of E. coli steers global responses to shifts in RNAP concentration
Lima De Brito Almeida, B. (Creator), Mohamed Bahrudeen, M. (Creator), Chauhan, V. (Creator), Dash, S. (Creator), Kandavalli, V. (Creator), Häkkinen, A. (Creator), Lloyd-Price, J. (Creator), Santos Dias Palma, C. (Creator), Calado Baptista, I. (Creator), Gupta, A. (Creator), Kesseli, J. (Creator), Dufour, E. (Creator), Smolander, O.-P. (Creator), Nykter, M. (Creator), Auvinen, P. (Creator), Jacobs, H. (Creator), M.D. Oliveira, S. (Creator) & Sanches Ribeiro, A. (Creator), Dryad, 15 Jul 2022
Dataset
Activities
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Multi-omics data analysis in GEMMA project
Autio, R. (Speaker), Salenius, K. (Speaker), Lin, J. (Speaker) & Nykter, M. (Speaker)
7 Feb 2020Activity: Talk or presentation › Conference presentation
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3D histology based on serial sectioning and computational reconstruction
Kartasalo, K. (Speaker), Latonen, L. (Speaker), Nykter, M. (Speaker), Ruusuvuori, P. (Speaker), Valkonen, M. (Speaker) & Visakorpi, T. (Speaker)
1 Jun 2018Activity: Talk or presentation › Conference presentation
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Integrative analysis of the proteome in prostate cancer uncovers robustness against genomic and transcriptomic aberrations during disease progression
Tammela, T. (Contributor), Aapola, U. (Contributor), Ebrahim, A. (Contributor), Annala, M. (Contributor), Jylhä, A. (Contributor), Latonen, L. (Contributor), Nykter, M. (Contributor), Nättinen, J. (Contributor), Uusitalo, H. (Contributor) & Visakorpi, T. (Contributor)
16 Mar 2018Activity: Talk or presentation › Conference presentation
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Integrative analysis of the proteome in primary and advanced prostate cancer
Latonen, L. (Contributor), Aapola, U. (Contributor), Ebrahim, A. (Contributor), Annala, M. (Contributor), Jylhä, A. (Contributor), Kivinummi, K. (Contributor), Nykter, M. (Contributor), Nättinen, J. (Contributor), Tammela, T. (Contributor), Uusitalo, H. (Contributor) & Visakorpi, T. (Contributor)
2 Dec 2017Activity: Talk or presentation › Conference presentation
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3D reconstruction and machine learning based analysis of prostate cancer from histological images
Ruusuvuori, P. (Contributor), Valkonen, M. (Contributor), Kartasalo, K. (Contributor), Visakorpi, T. (Contributor), Nykter, M. (Contributor) & Latonen, L. (Contributor)
2 Dec 2017Activity: Talk or presentation › Conference presentation