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Biocomputing Model Using Tripartite Synapses Provides Reliable Neuronal Logic Gating with Spike Pattern Diversity

  • Giulio Basso
  • , Michael Taynnan Barros

    Research output: Contribution to journalArticleScientificpeer-review

    3 Citations (Scopus)

    Abstract

    Biocomputing technologies exploit biological communication mechanisms involving cell-cell signal propagation to perform computations. Researchers recently worked toward realising logic gates made by neurons to develop novel devices such as organic neuroprostheses or brain implants made by cells, herein termed living implants. Several challenges arise from this approach, mainly associated with the stochastic nature and noise of neuronal communication. Since astrocytes play a crucial role in the regulation of neurons activity, there is a possibility whereby astrocytes can be engineered to control synapses favouring reliable biocomputing. This work proposes a mathematical model of neuronal logic gates involving neurons and astrocytes, realising OR and AND gating. We use a shallow coupling of both the Izhikevich and Postnov models to characterise gating responses with spike pattern variability and astrocyte synaptic regulation. Logic operation error ratio and accuracy assess the AND and OR gates’ performances at different synaptic Gaussian noise levels. Our results demonstrate that the astrocyte regulating activity can effectively be used as a denoising mechanism, paving the way for highly reliable biocomputing implementations.

    Original languageEnglish
    Pages (from-to)401 - 412
    Number of pages10
    JournalIEEE Transactions on Nanobioscience
    Volume22
    Issue number2
    Early online date2022
    DOIs
    Publication statusPublished - 2023
    Publication typeA1 Journal article-refereed

    Keywords

    • Bio-inspired computing
    • Biocomputing
    • Biological information theory
    • denoising
    • Integrated circuit modeling
    • Logic gates
    • molecular communications
    • Neurons
    • Proteins
    • reliable computing
    • Synapses
    • tripartite synapses

    Publication forum classification

    • Publication forum level 1

    ASJC Scopus subject areas

    • Biotechnology
    • Bioengineering
    • Medicine (miscellaneous)
    • Biomedical Engineering
    • Pharmaceutical Science
    • Computer Science Applications
    • Electrical and Electronic Engineering

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