Abstract
We present a dataset of microelectrode array (MEA) recordings from human pluripotent stem cell (hPSC)-derived and rat embryonic cortical neurons during their in vitro maturation. The data were prepared to assess extracellularly recorded spontaneous activity and to compare the functional development of these neuronal networks. In addition to recordings of spontaneous activity, we provide pharmacological responses of hPSC-derived and rat cortical cultures at their mature stage. Together with the recorded electrode raw data, we share the analysis code to form a comprehensive dataset including spike times, spike waveforms, burst activity and network synchronization metrics calculated with two different connectivity estimators. Moreover, we provide the analysis code that produced the key scientific findings published previously with this dataset. This large dataset enables investigation of the functional aspects of maturing cortical neuronal networks and provides substantial parameters to assess the differences and similarities between hPSC-derived and rat cortical networks in vitro. This publicly available dataset will be beneficial, especially for experimental and computational neuroscientists.
Original language | English |
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Article number | 120 |
Number of pages | 10 |
Journal | Scientific Data |
Volume | 9 |
DOIs | |
Publication status | Published - Mar 2022 |
Publication type | A1 Journal article-refereed |
Publication forum classification
- Publication forum level 1
ASJC Scopus subject areas
- Statistics and Probability
- Information Systems
- Education
- Computer Science Applications
- Statistics, Probability and Uncertainty
- Library and Information Sciences
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Comparative microelectrode array dataset of the functional development of hPSC-derived and rat neuronal networks
Kapucu, F. E. (Creator), Vinogradov, A. (Creator), Hyvärinen, T. (Creator), Ylä-Outinen, L. (Creator) & Narkilahti, S. (Creator), G-Node, 7 Mar 2021
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