Evaluation of methods for modeling transcription-factor sequence specificity

M. Weirauch; A. Cote; R. Norel; M. Annala; Y. Zhao; T. Riley; J. Saez-Rodriguez; T. Cokelaer; A. Vedenko; S. Talukder; P Agius; A Arvey; P Bucher; CG Callan; CW Chang; M Nykter; CY Chen; M. DREAM5 Consortium Nykter; YS Chen; YW Chu; J Grau; I Grosse; V Jagannathan; J Keilwagen; SM Kielbasa; JB Kinney; H Klein; MB Kursa; H Lähdesmäki; K Laurila; C Lei; C Leslie; C Linhart; A Murugan; A Myicková; WS Noble; Y Orenstein; S Posch; J Ruan; WR Rudnicki; CD Schmid; R Shamir; WK Sung; M Vingron; Z Zhang; H. Bussemaker; Q. Morris; M. Bulyk; G. Stolovitzky; T. Hughes

doi:10.1038/nbt.2486

Evaluation of methods for modeling transcription-factor sequence specificity

M. Weirauch, A. Cote, R. Norel, M. Annala, Y. Zhao, T. Riley, J. Saez-Rodriguez, T. Cokelaer, A. Vedenko, S. Talukder, P Agius, A Arvey, P Bucher, CG Callan, CW Chang, M Nykter, CY Chen, M. DREAM5 Consortium Nykter, YS Chen, YW ChuJ Grau, I Grosse, V Jagannathan, J Keilwagen, SM Kielbasa, JB Kinney, H Klein, MB Kursa, H Lähdesmäki, K Laurila, C Lei, C Leslie, C Linhart, A Murugan, A Myicková, WS Noble, Y Orenstein, S Posch, J Ruan, WR Rudnicki, CD Schmid, R Shamir, WK Sung, M Vingron, Z Zhang, H. Bussemaker, Q. Morris, M. Bulyk, G. Stolovitzky, T. Hughes

Research output: Contribution to journal › Article › Scientific › peer-review

290 Citations (Scopus)

Original language	English
Pages (from-to)	126-134
Number of pages	9
Journal	Nature Biotechnology
Volume	31
Issue number	2
DOIs	https://doi.org/10.1038/nbt.2486
Publication status	Published - 2013
Publication type	A1 Journal article-refereed

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Publication forum level 3

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10.1038/nbt.2486

Cite this

Weirauch, M., Cote, A., Norel, R., Annala, M., Zhao, Y., Riley, T., Saez-Rodriguez, J., Cokelaer, T., Vedenko, A., Talukder, S., Agius, P., Arvey, A., Bucher, P., Callan, CG., Chang, CW., Nykter, M., Chen, CY., Nykter, M. DREAM. C., Chen, YS., ... Hughes, T. (2013). Evaluation of methods for modeling transcription-factor sequence specificity. Nature Biotechnology, 31(2), 126-134. https://doi.org/10.1038/nbt.2486

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Weirauch, M, Cote, A, Norel, R, Annala, M, Zhao, Y, Riley, T, Saez-Rodriguez, J, Cokelaer, T, Vedenko, A, Talukder, S, Agius, P, Arvey, A, Bucher, P, Callan, CG, Chang, CW, Nykter, M, Chen, CY, Nykter, MDREAMC, Chen, YS, Chu, YW, Grau, J, Grosse, I, Jagannathan, V, Keilwagen, J, Kielbasa, SM, Kinney, JB, Klein, H, Kursa, MB, Lähdesmäki, H, Laurila, K, Lei, C, Leslie, C, Linhart, C, Murugan, A, Myicková, A, Noble, WS, Orenstein, Y, Posch, S, Ruan, J, Rudnicki, WR, Schmid, CD, Shamir, R, Sung, WK, Vingron, M, Zhang, Z, Bussemaker, H, Morris, Q, Bulyk, M, Stolovitzky, G & Hughes, T 2013, 'Evaluation of methods for modeling transcription-factor sequence specificity', Nature Biotechnology, vol. 31, no. 2, pp. 126-134. https://doi.org/10.1038/nbt.2486

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T1 - Evaluation of methods for modeling transcription-factor sequence specificity

AU - Weirauch, M.

AU - Cote, A.

AU - Norel, R.

AU - Annala, M.

AU - Zhao, Y.

AU - Riley, T.

AU - Saez-Rodriguez, J.

AU - Cokelaer, T.

AU - Vedenko, A.

AU - Talukder, S.

AU - Agius, P

AU - Arvey, A

AU - Bucher, P

AU - Callan, CG

AU - Chang, CW

AU - Nykter, M

AU - Chen, CY

AU - Nykter, M. DREAM5 Consortium

AU - Chen, YS

AU - Chu, YW

AU - Grau, J

AU - Grosse, I

AU - Jagannathan, V

AU - Keilwagen, J

AU - Kielbasa, SM

AU - Kinney, JB

AU - Klein, H

AU - Kursa, MB

AU - Lähdesmäki, H

AU - Laurila, K

AU - Lei, C

AU - Leslie, C

AU - Linhart, C

AU - Murugan, A

AU - Myicková, A

AU - Noble, WS

AU - Orenstein, Y

AU - Posch, S

AU - Ruan, J

AU - Rudnicki, WR

AU - Schmid, CD

AU - Shamir, R

AU - Sung, WK

AU - Vingron, M

AU - Zhang, Z

AU - Bussemaker, H.

AU - Morris, Q.

AU - Bulyk, M.

AU - Stolovitzky, G.

AU - Hughes, T.

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PY - 2013

Y1 - 2013

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DO - 10.1038/nbt.2486

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