FunMappOne : a tool to hierarchically organize and visually navigate functional gene annotations in multiple experiments

Giovanni Scala; Angela Serra; Veer Singh Marwah; Laura Aliisa Saarimäki; Dario Greco

doi:10.1186/s12859-019-2639-2

FunMappOne : a tool to hierarchically organize and visually navigate functional gene annotations in multiple experiments

Giovanni Scala
, Angela Serra
, Veer Singh Marwah
, Laura Aliisa Saarimäki
, Dario Greco

Research output: Contribution to journal › Article › Scientific › peer-review

40 Citations (Scopus)

Original language	English
Article number	79
Journal	BMC Bioinformatics
Volume	20
Issue number	1
DOIs	https://doi.org/10.1186/s12859-019-2639-2
Publication status	Published - 2019
Publication type	A1 Journal article-refereed

Keywords

Functional annotation
Gene Ontology
KEGG
Ontology visualization
Pathway visualization
R-Shiny
Reactome

Publication forum classification

Publication forum level 1

Access to Document

10.1186/s12859-019-2639-2

http://urn.fi/URN:NBN:fi:tuni-201905201809

FunMappOne: a tool to hierarchically organize and visually navigate functional gene annotations in multiple experiments
Scala, G. (Creator), Serra, A. (Creator), Marwah, V. (Creator), Saarimäki, L. (Contributor) & Greco, D. (Creator), figshare, 15 Feb 2019
DOI: 10.6084/m9.figshare.c.4404323.v1
Dataset

Cite this

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title = "FunMappOne : a tool to hierarchically organize and visually navigate functional gene annotations in multiple experiments",

keywords = "Functional annotation, Gene Ontology, KEGG, Ontology visualization, Pathway visualization, R-Shiny, Reactome, Functional annotation, Gene Ontology, KEGG, Ontology visualization, Pathway visualization, R-Shiny, Reactome",

author = "Giovanni Scala and Angela Serra and Marwah, \{Veer Singh\} and Saarim{\"a}ki, \{Laura Aliisa\} and Dario Greco",

year = "2019",

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AU - Scala, Giovanni

AU - Serra, Angela

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AU - Saarimäki, Laura Aliisa

AU - Greco, Dario

PY - 2019

Y1 - 2019

KW - Functional annotation

KW - Gene Ontology

KW - KEGG

KW - Ontology visualization

KW - Pathway visualization

KW - R-Shiny

KW - Reactome

KW - Functional annotation

KW - Gene Ontology

KW - KEGG

KW - Ontology visualization

KW - Pathway visualization

KW - R-Shiny

KW - Reactome

U2 - 10.1186/s12859-019-2639-2

DO - 10.1186/s12859-019-2639-2

M3 - Article

SN - 1471-2105

VL - 20

JO - BMC Bioinformatics

JF - BMC Bioinformatics

IS - 1

M1 - 79

ER -

FunMappOne : a tool to hierarchically organize and visually navigate functional gene annotations in multiple experiments

Keywords

Publication forum classification

Access to Document

Datasets

FunMappOne: a tool to hierarchically organize and visually navigate functional gene annotations in multiple experiments

Cite this