Genomic variation and strain-specific functional adaptation in the human gut microbiome during early life

T. Vatanen; D.R. Jacobs; DR Plichta; J. Somani; P.C. Münch; T.D. Arthur; A.B. Hall; S. Rudolf; E.J. Oakeley; X. Ke; R.A. Young; H.J. Haiser; R. Kolde; M. Yassour; K. Luopajärvi; H. Siljander; S.M. Virtanen; J. Ilonen; R. Uibo; V. Tillmann; S. Mokurov; N. Dorshakova; J.A. Porter; A.C. McHardy; H. Lähdesmäki; H. Vlamakis; C. Huttenhower; M. Knip; R.J. Xavier

doi:10.1038/s41564-018-0321-5

Genomic variation and strain-specific functional adaptation in the human gut microbiome during early life

T. Vatanen
, D.R. Jacobs
, DR Plichta
, J. Somani
, P.C. Münch
, T.D. Arthur
, A.B. Hall
, S. Rudolf
, E.J. Oakeley
, X. Ke
, R.A. Young
, H.J. Haiser
, R. Kolde
, M. Yassour
, K. Luopajärvi
, H. Siljander
, S.M. Virtanen
, J. Ilonen
, R. Uibo
, V. Tillmann

S. Mokurov, N. Dorshakova, J.A. Porter, A.C. McHardy, H. Lähdesmäki, H. Vlamakis, C. Huttenhower, M. Knip, R.J. Xavier

Research output: Contribution to journal › Article › Scientific › peer-review

194 Citations (Scopus)

Original language	English
Pages (from-to)	470-479
Journal	Nature Microbiology
Volume	4
Issue number	3
Early online date	2018
DOIs	https://doi.org/10.1038/s41564-018-0321-5
Publication status	Published - 2019
Publication type	A1 Journal article-refereed

Publication forum classification

Publication forum level 2

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10.1038/s41564-018-0321-5

Cite this

Vatanen, T., Jacobs, D. R., Plichta, DR., Somani, J., Münch, P. C., Arthur, T. D., Hall, A. B., Rudolf, S., Oakeley, E. J., Ke, X., Young, R. A., Haiser, H. J., Kolde, R., Yassour, M., Luopajärvi, K., Siljander, H., Virtanen, S. M., Ilonen, J., Uibo, R., ... Xavier, R. J. (2019). Genomic variation and strain-specific functional adaptation in the human gut microbiome during early life. Nature Microbiology, 4(3), 470-479. https://doi.org/10.1038/s41564-018-0321-5

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author = "T. Vatanen and D.R. Jacobs and DR Plichta and J. Somani and P.C. M{\"u}nch and T.D. Arthur and A.B. Hall and S. Rudolf and E.J. Oakeley and X. Ke and R.A. Young and H.J. Haiser and R. Kolde and M. Yassour and K. Luopaj{\"a}rvi and H. Siljander and S.M. Virtanen and J. Ilonen and R. Uibo and V. Tillmann and S. Mokurov and N. Dorshakova and J.A. Porter and A.C. McHardy and H. L{\"a}hdesm{\"a}ki and H. Vlamakis and C. Huttenhower and M. Knip and R.J. Xavier",

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Vatanen, T, Jacobs, DR, Plichta, DR, Somani, J, Münch, PC, Arthur, TD, Hall, AB, Rudolf, S, Oakeley, EJ, Ke, X, Young, RA, Haiser, HJ, Kolde, R, Yassour, M, Luopajärvi, K, Siljander, H, Virtanen, SM, Ilonen, J, Uibo, R, Tillmann, V, Mokurov, S, Dorshakova, N, Porter, JA, McHardy, AC, Lähdesmäki, H, Vlamakis, H, Huttenhower, C, Knip, M & Xavier, RJ 2019, 'Genomic variation and strain-specific functional adaptation in the human gut microbiome during early life', Nature Microbiology, vol. 4, no. 3, pp. 470-479. https://doi.org/10.1038/s41564-018-0321-5

TY - JOUR

T1 - Genomic variation and strain-specific functional adaptation in the human gut microbiome during early life

AU - Vatanen, T.

AU - Jacobs, D.R.

AU - Plichta, DR

AU - Somani, J.

AU - Münch, P.C.

AU - Arthur, T.D.

AU - Hall, A.B.

AU - Rudolf, S.

AU - Oakeley, E.J.

AU - Ke, X.

AU - Young, R.A.

AU - Haiser, H.J.

AU - Kolde, R.

AU - Yassour, M.

AU - Luopajärvi, K.

AU - Siljander, H.

AU - Virtanen, S.M.

AU - Ilonen, J.

AU - Uibo, R.

AU - Tillmann, V.

AU - Mokurov, S.

AU - Dorshakova, N.

AU - Porter, J.A.

AU - McHardy, A.C.

AU - Lähdesmäki, H.

AU - Vlamakis, H.

AU - Huttenhower, C.

AU - Knip, M.

AU - Xavier, R.J.

PY - 2019

Y1 - 2019

U2 - 10.1038/s41564-018-0321-5

DO - 10.1038/s41564-018-0321-5

M3 - Article

SN - 2058-5276

VL - 4

SP - 470

EP - 479

JO - Nature Microbiology

JF - Nature Microbiology

IS - 3

ER -