Seasonal influenza and avian influenza A(H5N1) virus surveillance among inpatients and outpatients, East Jakarta, Indonesia, 2011-2014

Kathryn E. Lafond; Catharina Y. Praptiningsih; Amalya Mangiri; Misriyah Syarif; Romadona Triada; Ester Mulyadi; Chita Septiawati; Vivi Setiawaty; Gina Samaan; Aaron D. Storms; Timothy M. Uyeki; A. Danielle Iuliano

doi:10.3201/eid2511.181844

Seasonal influenza and avian influenza A(H5N1) virus surveillance among inpatients and outpatients, East Jakarta, Indonesia, 2011-2014

Kathryn E. Lafond^*
, Catharina Y. Praptiningsih
, Amalya Mangiri
, Misriyah Syarif
, Romadona Triada
, Ester Mulyadi
, Chita Septiawati
, Vivi Setiawaty
, Gina Samaan
, Aaron D. Storms
, Timothy M. Uyeki
, A. Danielle Iuliano

^*Corresponding author for this work

Research output: Contribution to journal › Article › Scientific › peer-review

5 Citations (Scopus)

Abstract

During October 2011-September 2014, we screened respiratory specimens for seasonal and avian influenza A(H5N1) virus infections among outpatients with influenza-like illness and inpatients with severe acute respiratory infection (SARI) in East Jakarta, an Indonesia district with high incidence of H5N1 virus infection among poultry. In total, 31% (1,875/6,008) of influenza-like illness case-patients and 15% (571/3,811) of SARI case-patients tested positive for influenza virus. Influenza A(H1N1)pdm09, influenza A(H3N2), and influenza B virus infections were detected in all 3 years, and the epidemic season extended from November through May. Although 28% (2,810/10,135) of case-patients reported exposure to poultry, only 1 SARI case-patient with an H5N1 virus infection was detected. Therefore, targeted screening among case-patients with high-risk poultry exposures (e.g., a recent visit to a live bird market or close proximity to sick or dead poultry) may be a more efficient routine surveillance strategy for H5N1 virus in these types of settings.

Original language	English
Pages (from-to)	2031-2039
Number of pages	9
Journal	Emerging Infectious Diseases
Volume	25
Issue number	11
DOIs	https://doi.org/10.3201/eid2511.181844
Publication status	Published - 2019
Publication type	A1 Journal article-refereed

Funding

We acknowledge the following colleagues for their contributions, support, and encouragement: clinical surveillance staff at the 10 participating sites (Haji Pondok Gede Hospital, Islam Pondok Kopi Hospital, Harapan Bunda Hospital, Pasar Rebo Hospital, Budhi Asih Hospital, Persahabatan Hospital, Matraman Health Center, Kramat Jati Health Center, Pulogadung Health Center, and Duren Sawit Health Center) and laboratory staff at the Provincial Health Laboratory of DKI Jakarta, Balai Besar Teknik Kesehatan Lingkungan Jakarta Laboratory, Infectious Disease Hospital Sulianti Saroso Laboratory, and National Institute of Health Research and Development of Indonesia. We also thank staff at DKI Jakarta Provincial Health Office, the East Jakarta District Health Office, and the Zoonosis Sub Directorate Ministry of Health Indonesia and colleagues at Regional Emerging Diseases Intervention Centre, the Food and Agriculture Organization of the United Nations, Ministry of Agriculture Indonesia, US Agency for International Development, and the US Agency for International Development Deliver Project. This project was funded by the US Centers for Disease Control and Prevention cooperative agreement IP000346.

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

SDG 3 Good Health and Well-being

Publication forum classification

Publication forum level 2

ASJC Scopus subject areas

Epidemiology
Microbiology (medical)
Infectious Diseases

Access to Document

10.3201/eid2511.181844

Cite this

Lafond, K. E., Praptiningsih, C. Y., Mangiri, A., Syarif, M., Triada, R., Mulyadi, E., Septiawati, C., Setiawaty, V., Samaan, G., Storms, A. D., Uyeki, T. M., & Danielle Iuliano, A. (2019). Seasonal influenza and avian influenza A(H5N1) virus surveillance among inpatients and outpatients, East Jakarta, Indonesia, 2011-2014. Emerging Infectious Diseases, 25(11), 2031-2039. https://doi.org/10.3201/eid2511.181844

@article{f253afdcd4334bf7b47261b663f1432a,

title = "Seasonal influenza and avian influenza A(H5N1) virus surveillance among inpatients and outpatients, East Jakarta, Indonesia, 2011-2014",

abstract = "During October 2011-September 2014, we screened respiratory specimens for seasonal and avian influenza A(H5N1) virus infections among outpatients with influenza-like illness and inpatients with severe acute respiratory infection (SARI) in East Jakarta, an Indonesia district with high incidence of H5N1 virus infection among poultry. In total, 31\% (1,875/6,008) of influenza-like illness case-patients and 15\% (571/3,811) of SARI case-patients tested positive for influenza virus. Influenza A(H1N1)pdm09, influenza A(H3N2), and influenza B virus infections were detected in all 3 years, and the epidemic season extended from November through May. Although 28\% (2,810/10,135) of case-patients reported exposure to poultry, only 1 SARI case-patient with an H5N1 virus infection was detected. Therefore, targeted screening among case-patients with high-risk poultry exposures (e.g., a recent visit to a live bird market or close proximity to sick or dead poultry) may be a more efficient routine surveillance strategy for H5N1 virus in these types of settings.",

author = "Lafond, \{Kathryn E.\} and Praptiningsih, \{Catharina Y.\} and Amalya Mangiri and Misriyah Syarif and Romadona Triada and Ester Mulyadi and Chita Septiawati and Vivi Setiawaty and Gina Samaan and Storms, \{Aaron D.\} and Uyeki, \{Timothy M.\} and \{Danielle Iuliano\}, A.",

note = "Funding Information: We acknowledge the following colleagues for their contributions, support, and encouragement: clinical surveillance staff at the 10 participating sites (Haji Pondok Gede Hospital, Islam Pondok Kopi Hospital, Harapan Bunda Hospital, Pasar Rebo Hospital, Budhi Asih Hospital, Persahabatan Hospital, Matraman Health Center, Kramat Jati Health Center, Pulogadung Health Center, and Duren Sawit Health Center) and laboratory staff at the Provincial Health Laboratory of DKI Jakarta, Balai Besar Teknik Kesehatan Lingkungan Jakarta Laboratory, Infectious Disease Hospital Sulianti Saroso Laboratory, and National Institute of Health Research and Development of Indonesia. We also thank staff at DKI Jakarta Provincial Health Office, the East Jakarta District Health Office, and the Zoonosis Sub Directorate Ministry of Health Indonesia and colleagues at Regional Emerging Diseases Intervention Centre, the Food and Agriculture Organization of the United Nations, Ministry of Agriculture Indonesia, US Agency for International Development, and the US Agency for International Development Deliver Project. Funding Information: This project was funded by the US Centers for Disease Control and Prevention cooperative agreement IP000346. Publisher Copyright: {\textcopyright} 2019 Centers for Disease Control and Prevention (CDC). All rights reserved. Copyright: Copyright 2019 Elsevier B.V., All rights reserved.",

year = "2019",

doi = "10.3201/eid2511.181844",

language = "English",

volume = "25",

pages = "2031--2039",

journal = "Emerging Infectious Diseases",

issn = "1080-6040",

publisher = "Centers for Disease Control and Prevention (CDC)",

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Lafond, KE, Praptiningsih, CY, Mangiri, A, Syarif, M, Triada, R, Mulyadi, E, Septiawati, C, Setiawaty, V, Samaan, G, Storms, AD, Uyeki, TM & Danielle Iuliano, A 2019, 'Seasonal influenza and avian influenza A(H5N1) virus surveillance among inpatients and outpatients, East Jakarta, Indonesia, 2011-2014', Emerging Infectious Diseases, vol. 25, no. 11, pp. 2031-2039. https://doi.org/10.3201/eid2511.181844

TY - JOUR

T1 - Seasonal influenza and avian influenza A(H5N1) virus surveillance among inpatients and outpatients, East Jakarta, Indonesia, 2011-2014

AU - Lafond, Kathryn E.

AU - Praptiningsih, Catharina Y.

AU - Mangiri, Amalya

AU - Syarif, Misriyah

AU - Triada, Romadona

AU - Mulyadi, Ester

AU - Septiawati, Chita

AU - Setiawaty, Vivi

AU - Samaan, Gina

AU - Storms, Aaron D.

AU - Uyeki, Timothy M.

AU - Danielle Iuliano, A.

N1 - Funding Information: We acknowledge the following colleagues for their contributions, support, and encouragement: clinical surveillance staff at the 10 participating sites (Haji Pondok Gede Hospital, Islam Pondok Kopi Hospital, Harapan Bunda Hospital, Pasar Rebo Hospital, Budhi Asih Hospital, Persahabatan Hospital, Matraman Health Center, Kramat Jati Health Center, Pulogadung Health Center, and Duren Sawit Health Center) and laboratory staff at the Provincial Health Laboratory of DKI Jakarta, Balai Besar Teknik Kesehatan Lingkungan Jakarta Laboratory, Infectious Disease Hospital Sulianti Saroso Laboratory, and National Institute of Health Research and Development of Indonesia. We also thank staff at DKI Jakarta Provincial Health Office, the East Jakarta District Health Office, and the Zoonosis Sub Directorate Ministry of Health Indonesia and colleagues at Regional Emerging Diseases Intervention Centre, the Food and Agriculture Organization of the United Nations, Ministry of Agriculture Indonesia, US Agency for International Development, and the US Agency for International Development Deliver Project. Funding Information: This project was funded by the US Centers for Disease Control and Prevention cooperative agreement IP000346. Publisher Copyright: © 2019 Centers for Disease Control and Prevention (CDC). All rights reserved. Copyright: Copyright 2019 Elsevier B.V., All rights reserved.

PY - 2019

Y1 - 2019

N2 - During October 2011-September 2014, we screened respiratory specimens for seasonal and avian influenza A(H5N1) virus infections among outpatients with influenza-like illness and inpatients with severe acute respiratory infection (SARI) in East Jakarta, an Indonesia district with high incidence of H5N1 virus infection among poultry. In total, 31% (1,875/6,008) of influenza-like illness case-patients and 15% (571/3,811) of SARI case-patients tested positive for influenza virus. Influenza A(H1N1)pdm09, influenza A(H3N2), and influenza B virus infections were detected in all 3 years, and the epidemic season extended from November through May. Although 28% (2,810/10,135) of case-patients reported exposure to poultry, only 1 SARI case-patient with an H5N1 virus infection was detected. Therefore, targeted screening among case-patients with high-risk poultry exposures (e.g., a recent visit to a live bird market or close proximity to sick or dead poultry) may be a more efficient routine surveillance strategy for H5N1 virus in these types of settings.

AB - During October 2011-September 2014, we screened respiratory specimens for seasonal and avian influenza A(H5N1) virus infections among outpatients with influenza-like illness and inpatients with severe acute respiratory infection (SARI) in East Jakarta, an Indonesia district with high incidence of H5N1 virus infection among poultry. In total, 31% (1,875/6,008) of influenza-like illness case-patients and 15% (571/3,811) of SARI case-patients tested positive for influenza virus. Influenza A(H1N1)pdm09, influenza A(H3N2), and influenza B virus infections were detected in all 3 years, and the epidemic season extended from November through May. Although 28% (2,810/10,135) of case-patients reported exposure to poultry, only 1 SARI case-patient with an H5N1 virus infection was detected. Therefore, targeted screening among case-patients with high-risk poultry exposures (e.g., a recent visit to a live bird market or close proximity to sick or dead poultry) may be a more efficient routine surveillance strategy for H5N1 virus in these types of settings.

U2 - 10.3201/eid2511.181844

DO - 10.3201/eid2511.181844

M3 - Article

C2 - 31625837

AN - SCOPUS:85073619841

SN - 1080-6040

VL - 25

SP - 2031

EP - 2039

JO - Emerging Infectious Diseases

JF - Emerging Infectious Diseases

IS - 11

ER -

Seasonal influenza and avian influenza A(H5N1) virus surveillance among inpatients and outpatients, East Jakarta, Indonesia, 2011-2014

Abstract

Funding

UN SDGs

Publication forum classification

ASJC Scopus subject areas

Access to Document

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