The effect of automated taxa identification errors on biological indices

Johanna Ärje, Salme Kärkkäinen, Kristian Meissner, Alexandros Iosifidis, Türker Ince, Moncef Gabbouj, Serkan Kiranyaz

    Research output: Contribution to journalArticleScientificpeer-review

    5 Citations (Scopus)

    Abstract

    In benthic macroinvertebrate biomonitoring systems, the target is to determine the status of ecosystems based on several biological indices. To increase cost-efficiency, computer-based taxa identification for image data has recently been developed. Taxa identification errors can, however, have strong effects on the indices and thus on the determination of the ecological status. In order to shift the biomonitoring process towards automated expert systems, we need a clear understanding on the bias caused by automation. In this paper, we examine eleven classification methods in the case of macroinvertebrate image data and show how their classification errors propagate into different biological indices. We evaluate 14 richness, diversity, dominance and similarity indices commonly used in biomonitoring. Besides the error rate of the classification method, we discuss the potential effect of different types of identification errors. Finally, we provide recommendations on indices that are least affected by the automatic identification errors and could be used in automated biomonitoring.
    Original languageEnglish
    Pages (from-to)108-120
    JournalExpert Systems with Applications
    Volume72
    DOIs
    Publication statusPublished - 13 Dec 2016
    Publication typeA1 Journal article-refereed

    Keywords

    • Biomonitoring
    • Classification error
    • Diversity: Error propagation
    • Identification
    • Similarity

    Publication forum classification

    • Publication forum level 1

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