Toxicogenomic assessment of in vitro macrophages exposed to profibrotic challenge reveals a sustained transcriptomic immune signature

Jack Morikka, Antonio Federico, Lena Möbus, Simo Inkala, Alisa Pavel, Saara Sani, Maaret Vaani, Sanna Peltola, Angela Serra, Dario Greco

Research output: Contribution to journalArticleScientificpeer-review

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Abstract

Immune signalling is a crucial component in the progression of fibrosis. However, approaches for the safety assessment of potentially profibrotic substances, that provide information on mechanistic immune responses, are underdeveloped. This study aimed to develop a novel framework for assessing the immunotoxicity of fibrotic compounds. We exposed macrophages in vitro to multiple sublethal concentrations of the profibrotic agent bleomycin, over multiple timepoints, and generated RNA sequencing data. Using a toxicogenomic approach, we performed dose-dependent analysis to discover genes dysregulated by bleomycin exposure in a dose-responsive manner. A subset of immune genes displayed a sustained dose-dependent and differential expression response to profibrotic challenge. An immunoassay revealed cytokines and proteinases responding to bleomycin exposure that closely correlated to transcriptomic alterations, underscoring the integration between transcriptional immune response and external immune signalling activity. This study not only increases our understanding of the immunological mechanisms of fibrosis, but also offers an innovative framework for the toxicological evaluation of substances with potential fibrogenic effects on macrophage signalling. Our work brings a new immunotoxicogenomic direction for hazard assessment of fibrotic compounds, through the implementation of a time and resource efficient in vitro methodology.

Original languageEnglish
Pages (from-to)194-204
Number of pages11
JournalComputational and structural biotechnology journal
Volume25
DOIs
Publication statusPublished - Dec 2024
Publication typeA1 Journal article-refereed

Keywords

  • Bleomycin
  • Dose-dependent Modelling
  • Fibrosis
  • Macrophage
  • Safety Assessment
  • Toxicogenomics

Publication forum classification

  • Publication forum level 1

ASJC Scopus subject areas

  • Biotechnology
  • Biophysics
  • Structural Biology
  • Biochemistry
  • Genetics
  • Computer Science Applications

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