Update on activities at the Universal Protein Resource (UniProt) in 2013

Rolf Apweiler; Maria Jesus Martin; Claire O'Donovan; Michele Magrane; Yasmin Alam-Faruque; Emanuela Alpi; Ricardo Antunes; Joanna Arganiska; Elisabet Barrera Casanova; Benoit Bely; Mark Bingley; Carlos Bonilla; Ramona Britto; Borisas Bursteinas; Wei Mun Chan; Gayatri Chavali; Elena Cibrian-Uhalte; Alan Da Silva; Maurizio De Giorgi; Emily Dimmer; Francesco Fazzini; Paul Gane; Alexander Fedotov; Leyla Garcia Castro; Penelope Garmiri; Emma Hatton-Ellis; Reija Hieta; Rachael Huntley; Julius Jacobsen; Rachel Jones; Duncan Legge; Wudong Liu; Jie Luo; Alistair MacDougall; Prudence Mutowo; Andrew Nightingale; Sandra Orchard; Samuel Patient; Klemens Pichler; Diego Poggioli; Sangya Pundir; Luis Pureza; Guoying Qi; Steven Rosanoff; Tony Sawford; Harminder Sehra; Edward Turner; Vladimir Volynkin; Tony Wardell; Xavier Watkins; Hermann Zellner; Matt Corbett; Mike Donnelly; Pieter Van Rensburg; Mickael Goujon; Hamish McWilliam; Rodrigo Lopez; Ioannis Xenarios; Lydie Bougueleret; Alan Bridge; Sylvain Poux; Nicole Redaschi; Andrea Auchincloss; Kristian Axelsen; Parit Bansal; Delphine Baratin; Pierre Alain Binz; Marie Claude Blatter; Brigitte Boeckmann; Jerven Bolleman; Emmanuel Boutet; Lionel Breuza; Edouard De Castro; Lorenzo Cerutti; Elisabeth Coudert; Beatrice Cuche; Mikael Doche; Dolnide Dornevil; Severine Duvaud; Anne Estreicher; Livia Famiglietti; Marc Feuermann; Elisabeth Gasteiger; Sebastien Gehant; Vivienne Gerritsen; Arnaud Gos; Nadine Gruaz-Gumowski; Ursula Hinz; Chantal Hulo; Janet James; Florence Jungo; Guillaume Keller; Vicente Lara; Philippe Lemercier; Jocelyne Lew; Damien Lieberherr; Xavier Martin; Patrick Masson; Anne Morgat; Teresa Neto; Salvo Paesano; Ivo Pedruzzi; Sandrine Pilbout; Monica Pozzato; Manuela Pruess; Catherine Rivoire; Bernd Roechert; Michel Schneider; Christian Sigrist; Karin Sonesson; Sylvie Staehli; Andre Stutz; Shyamala Sundaram; Michael Tognolli; Laure Verbregue; Anne Lise Veuthey; Mohamed Zerara; Cathy H. Wu; Cecilia N. Arighi; Leslie Arminski; Chuming Chen; Yongxing Chen; Hongzhan Huang; Abhishek Kukreja; Kati Laiho; Peter McGarvey; Darren A. Natale; Thanemozhi G. Natarajan; Natalia V. Roberts; Baris E. Suzek; C. R. Vinayaka; Qinghua Wang; Yuqi Wang; Lai Su Yeh; Meher Shruti Yerramalla; Jian Zhang

doi:10.1093/nar/gks1068

Update on activities at the Universal Protein Resource (UniProt) in 2013

Rolf Apweiler, Maria Jesus Martin, Claire O'Donovan, Michele Magrane, Yasmin Alam-Faruque, Emanuela Alpi, Ricardo Antunes, Joanna Arganiska, Elisabet Barrera Casanova, Benoit Bely, Mark Bingley, Carlos Bonilla, Ramona Britto, Borisas Bursteinas, Wei Mun Chan, Gayatri Chavali, Elena Cibrian-Uhalte, Alan Da Silva, Maurizio De Giorgi, Emily DimmerFrancesco Fazzini, Paul Gane, Alexander Fedotov, Leyla Garcia Castro, Penelope Garmiri, Emma Hatton-Ellis, Reija Hieta, Rachael Huntley, Julius Jacobsen, Rachel Jones, Duncan Legge, Wudong Liu, Jie Luo, Alistair MacDougall, Prudence Mutowo, Andrew Nightingale, Sandra Orchard, Samuel Patient, Klemens Pichler, Diego Poggioli, Sangya Pundir, Luis Pureza, Guoying Qi, Steven Rosanoff, Tony Sawford, Harminder Sehra, Edward Turner, Vladimir Volynkin, Tony Wardell, Xavier Watkins, Hermann Zellner, Matt Corbett, Mike Donnelly, Pieter Van Rensburg, Mickael Goujon, Hamish McWilliam, Rodrigo Lopez, Ioannis Xenarios, Lydie Bougueleret, Alan Bridge, Sylvain Poux, Nicole Redaschi, Andrea Auchincloss, Kristian Axelsen, Parit Bansal, Delphine Baratin, Pierre Alain Binz, Marie Claude Blatter, Brigitte Boeckmann, Jerven Bolleman, Emmanuel Boutet, Lionel Breuza, Edouard De Castro, Lorenzo Cerutti, Elisabeth Coudert, Beatrice Cuche, Mikael Doche, Dolnide Dornevil, Severine Duvaud, Anne Estreicher, Livia Famiglietti, Marc Feuermann, Elisabeth Gasteiger, Sebastien Gehant, Vivienne Gerritsen, Arnaud Gos, Nadine Gruaz-Gumowski, Ursula Hinz, Chantal Hulo, Janet James, Florence Jungo, Guillaume Keller, Vicente Lara, Philippe Lemercier, Jocelyne Lew, Damien Lieberherr, Xavier Martin, Patrick Masson, Anne Morgat, Teresa Neto, Salvo Paesano, Ivo Pedruzzi, Sandrine Pilbout, Monica Pozzato, Manuela Pruess, Catherine Rivoire, Bernd Roechert, Michel Schneider, Christian Sigrist, Karin Sonesson, Sylvie Staehli, Andre Stutz, Shyamala Sundaram, Michael Tognolli, Laure Verbregue, Anne Lise Veuthey, Mohamed Zerara, Cathy H. Wu, Cecilia N. Arighi, Leslie Arminski, Chuming Chen, Yongxing Chen, Hongzhan Huang, Abhishek Kukreja, Kati Laiho, Peter McGarvey, Darren A. Natale, Thanemozhi G. Natarajan, Natalia V. Roberts, Baris E. Suzek, C. R. Vinayaka, Qinghua Wang, Yuqi Wang, Lai Su Yeh, Meher Shruti Yerramalla, Jian Zhang

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612 Citations (Scopus)

Abstract

The mission of the Universal Protein Resource (UniProt) (http://www.uniprot.org) is to support biological research by providing a freely accessible, stable, comprehensive, fully classified, richly and accurately annotated protein sequence knowledgebase. It integrates, interprets and standardizes data from numerous resources to achieve the most comprehensive catalogue of protein sequences and functional annotation. UniProt comprises four major components, each optimized for different uses, the UniProt Archive, the UniProt Knowledgebase, the UniProt Reference Clusters and the UniProt Metagenomic and Environmental Sequence Database. UniProt is produced by the UniProt Consortium, which consists of groups from the European Bioinformatics Institute (EBI), the SIB Swiss Institute of Bioinformatics (SIB) and the Protein Information Resource (PIR). UniProt is updated and distributed every 4 weeks and can be accessed online for searches or downloads.

Original language	English
Journal	Nucleic Acids Research
Volume	41
Issue number	D1
DOIs	https://doi.org/10.1093/nar/gks1068
Publication status	Published - 1 Jan 2013
Publication type	A1 Journal article-refereed

ASJC Scopus subject areas

Genetics

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10.1093/nar/gks1068

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Apweiler, R., Martin, M. J., O'Donovan, C., Magrane, M., Alam-Faruque, Y., Alpi, E., Antunes, R., Arganiska, J., Casanova, E. B., Bely, B., Bingley, M., Bonilla, C., Britto, R., Bursteinas, B., Chan, W. M., Chavali, G., Cibrian-Uhalte, E., Da Silva, A., De Giorgi, M., ... Zhang, J. (2013). Update on activities at the Universal Protein Resource (UniProt) in 2013. Nucleic Acids Research, 41(D1). https://doi.org/10.1093/nar/gks1068

@article{a487e08179e74f60b7723aa577306a33,

title = "Update on activities at the Universal Protein Resource (UniProt) in 2013",

abstract = "The mission of the Universal Protein Resource (UniProt) (http://www.uniprot.org) is to support biological research by providing a freely accessible, stable, comprehensive, fully classified, richly and accurately annotated protein sequence knowledgebase. It integrates, interprets and standardizes data from numerous resources to achieve the most comprehensive catalogue of protein sequences and functional annotation. UniProt comprises four major components, each optimized for different uses, the UniProt Archive, the UniProt Knowledgebase, the UniProt Reference Clusters and the UniProt Metagenomic and Environmental Sequence Database. UniProt is produced by the UniProt Consortium, which consists of groups from the European Bioinformatics Institute (EBI), the SIB Swiss Institute of Bioinformatics (SIB) and the Protein Information Resource (PIR). UniProt is updated and distributed every 4 weeks and can be accessed online for searches or downloads.",

author = "Rolf Apweiler and Martin, {Maria Jesus} and Claire O'Donovan and Michele Magrane and Yasmin Alam-Faruque and Emanuela Alpi and Ricardo Antunes and Joanna Arganiska and Casanova, {Elisabet Barrera} and Benoit Bely and Mark Bingley and Carlos Bonilla and Ramona Britto and Borisas Bursteinas and Chan, {Wei Mun} and Gayatri Chavali and Elena Cibrian-Uhalte and {Da Silva}, Alan and {De Giorgi}, Maurizio and Emily Dimmer and Francesco Fazzini and Paul Gane and Alexander Fedotov and Castro, {Leyla Garcia} and Penelope Garmiri and Emma Hatton-Ellis and Reija Hieta and Rachael Huntley and Julius Jacobsen and Rachel Jones and Duncan Legge and Wudong Liu and Jie Luo and Alistair MacDougall and Prudence Mutowo and Andrew Nightingale and Sandra Orchard and Samuel Patient and Klemens Pichler and Diego Poggioli and Sangya Pundir and Luis Pureza and Guoying Qi and Steven Rosanoff and Tony Sawford and Harminder Sehra and Edward Turner and Vladimir Volynkin and Tony Wardell and Xavier Watkins and Hermann Zellner and Matt Corbett and Mike Donnelly and {Van Rensburg}, Pieter and Mickael Goujon and Hamish McWilliam and Rodrigo Lopez and Ioannis Xenarios and Lydie Bougueleret and Alan Bridge and Sylvain Poux and Nicole Redaschi and Andrea Auchincloss and Kristian Axelsen and Parit Bansal and Delphine Baratin and Binz, {Pierre Alain} and Blatter, {Marie Claude} and Brigitte Boeckmann and Jerven Bolleman and Emmanuel Boutet and Lionel Breuza and {De Castro}, Edouard and Lorenzo Cerutti and Elisabeth Coudert and Beatrice Cuche and Mikael Doche and Dolnide Dornevil and Severine Duvaud and Anne Estreicher and Livia Famiglietti and Marc Feuermann and Elisabeth Gasteiger and Sebastien Gehant and Vivienne Gerritsen and Arnaud Gos and Nadine Gruaz-Gumowski and Ursula Hinz and Chantal Hulo and Janet James and Florence Jungo and Guillaume Keller and Vicente Lara and Philippe Lemercier and Jocelyne Lew and Damien Lieberherr and Xavier Martin and Patrick Masson and Anne Morgat and Teresa Neto and Salvo Paesano and Ivo Pedruzzi and Sandrine Pilbout and Monica Pozzato and Manuela Pruess and Catherine Rivoire and Bernd Roechert and Michel Schneider and Christian Sigrist and Karin Sonesson and Sylvie Staehli and Andre Stutz and Shyamala Sundaram and Michael Tognolli and Laure Verbregue and Veuthey, {Anne Lise} and Mohamed Zerara and Wu, {Cathy H.} and Arighi, {Cecilia N.} and Leslie Arminski and Chuming Chen and Yongxing Chen and Hongzhan Huang and Abhishek Kukreja and Kati Laiho and Peter McGarvey and Natale, {Darren A.} and Natarajan, {Thanemozhi G.} and Roberts, {Natalia V.} and Suzek, {Baris E.} and Vinayaka, {C. R.} and Qinghua Wang and Yuqi Wang and Yeh, {Lai Su} and Yerramalla, {Meher Shruti} and Jian Zhang",

year = "2013",

month = jan,

day = "1",

doi = "10.1093/nar/gks1068",

language = "English",

volume = "41",

journal = "Nucleic Acids Research",

issn = "0305-1048",

publisher = "Oxford University Press",

number = "D1",

}

Apweiler, R, Martin, MJ, O'Donovan, C, Magrane, M, Alam-Faruque, Y, Alpi, E, Antunes, R, Arganiska, J, Casanova, EB, Bely, B, Bingley, M, Bonilla, C, Britto, R, Bursteinas, B, Chan, WM, Chavali, G, Cibrian-Uhalte, E, Da Silva, A, De Giorgi, M, Dimmer, E, Fazzini, F, Gane, P, Fedotov, A, Castro, LG, Garmiri, P, Hatton-Ellis, E, Hieta, R, Huntley, R, Jacobsen, J, Jones, R, Legge, D, Liu, W, Luo, J, MacDougall, A, Mutowo, P, Nightingale, A, Orchard, S, Patient, S, Pichler, K, Poggioli, D, Pundir, S, Pureza, L, Qi, G, Rosanoff, S, Sawford, T, Sehra, H, Turner, E, Volynkin, V, Wardell, T, Watkins, X, Zellner, H, Corbett, M, Donnelly, M, Van Rensburg, P, Goujon, M, McWilliam, H, Lopez, R, Xenarios, I, Bougueleret, L, Bridge, A, Poux, S, Redaschi, N, Auchincloss, A, Axelsen, K, Bansal, P, Baratin, D, Binz, PA, Blatter, MC, Boeckmann, B, Bolleman, J, Boutet, E, Breuza, L, De Castro, E, Cerutti, L, Coudert, E, Cuche, B, Doche, M, Dornevil, D, Duvaud, S, Estreicher, A, Famiglietti, L, Feuermann, M, Gasteiger, E, Gehant, S, Gerritsen, V, Gos, A, Gruaz-Gumowski, N, Hinz, U, Hulo, C, James, J, Jungo, F, Keller, G, Lara, V, Lemercier, P, Lew, J, Lieberherr, D, Martin, X, Masson, P, Morgat, A, Neto, T, Paesano, S, Pedruzzi, I, Pilbout, S, Pozzato, M, Pruess, M, Rivoire, C, Roechert, B, Schneider, M, Sigrist, C, Sonesson, K, Staehli, S, Stutz, A, Sundaram, S, Tognolli, M, Verbregue, L, Veuthey, AL, Zerara, M, Wu, CH, Arighi, CN, Arminski, L, Chen, C, Chen, Y, Huang, H, Kukreja, A, Laiho, K, McGarvey, P, Natale, DA, Natarajan, TG, Roberts, NV, Suzek, BE, Vinayaka, CR, Wang, Q, Wang, Y, Yeh, LS, Yerramalla, MS & Zhang, J 2013, 'Update on activities at the Universal Protein Resource (UniProt) in 2013', Nucleic Acids Research, vol. 41, no. D1. https://doi.org/10.1093/nar/gks1068

TY - JOUR

T1 - Update on activities at the Universal Protein Resource (UniProt) in 2013

AU - Apweiler, Rolf

AU - Martin, Maria Jesus

AU - O'Donovan, Claire

AU - Magrane, Michele

AU - Alam-Faruque, Yasmin

AU - Alpi, Emanuela

AU - Antunes, Ricardo

AU - Arganiska, Joanna

AU - Casanova, Elisabet Barrera

AU - Bely, Benoit

AU - Bingley, Mark

AU - Bonilla, Carlos

AU - Britto, Ramona

AU - Bursteinas, Borisas

AU - Chan, Wei Mun

AU - Chavali, Gayatri

AU - Cibrian-Uhalte, Elena

AU - Da Silva, Alan

AU - De Giorgi, Maurizio

AU - Dimmer, Emily

AU - Fazzini, Francesco

AU - Gane, Paul

AU - Fedotov, Alexander

AU - Castro, Leyla Garcia

AU - Garmiri, Penelope

AU - Hatton-Ellis, Emma

AU - Hieta, Reija

AU - Huntley, Rachael

AU - Jacobsen, Julius

AU - Jones, Rachel

AU - Legge, Duncan

AU - Liu, Wudong

AU - Luo, Jie

AU - MacDougall, Alistair

AU - Mutowo, Prudence

AU - Nightingale, Andrew

AU - Orchard, Sandra

AU - Patient, Samuel

AU - Pichler, Klemens

AU - Poggioli, Diego

AU - Pundir, Sangya

AU - Pureza, Luis

AU - Qi, Guoying

AU - Rosanoff, Steven

AU - Sawford, Tony

AU - Sehra, Harminder

AU - Turner, Edward

AU - Volynkin, Vladimir

AU - Wardell, Tony

AU - Watkins, Xavier

AU - Zellner, Hermann

AU - Corbett, Matt

AU - Donnelly, Mike

AU - Van Rensburg, Pieter

AU - Goujon, Mickael

AU - McWilliam, Hamish

AU - Lopez, Rodrigo

AU - Xenarios, Ioannis

AU - Bougueleret, Lydie

AU - Bridge, Alan

AU - Poux, Sylvain

AU - Redaschi, Nicole

AU - Auchincloss, Andrea

AU - Axelsen, Kristian

AU - Bansal, Parit

AU - Baratin, Delphine

AU - Binz, Pierre Alain

AU - Blatter, Marie Claude

AU - Boeckmann, Brigitte

AU - Bolleman, Jerven

AU - Boutet, Emmanuel

AU - Breuza, Lionel

AU - De Castro, Edouard

AU - Cerutti, Lorenzo

AU - Coudert, Elisabeth

AU - Cuche, Beatrice

AU - Doche, Mikael

AU - Dornevil, Dolnide

AU - Duvaud, Severine

AU - Estreicher, Anne

AU - Famiglietti, Livia

AU - Feuermann, Marc

AU - Gasteiger, Elisabeth

AU - Gehant, Sebastien

AU - Gerritsen, Vivienne

AU - Gos, Arnaud

AU - Gruaz-Gumowski, Nadine

AU - Hinz, Ursula

AU - Hulo, Chantal

AU - James, Janet

AU - Jungo, Florence

AU - Keller, Guillaume

AU - Lara, Vicente

AU - Lemercier, Philippe

AU - Lew, Jocelyne

AU - Lieberherr, Damien

AU - Martin, Xavier

AU - Masson, Patrick

AU - Morgat, Anne

AU - Neto, Teresa

AU - Paesano, Salvo

AU - Pedruzzi, Ivo

AU - Pilbout, Sandrine

AU - Pozzato, Monica

AU - Pruess, Manuela

AU - Rivoire, Catherine

AU - Roechert, Bernd

AU - Schneider, Michel

AU - Sigrist, Christian

AU - Sonesson, Karin

AU - Staehli, Sylvie

AU - Stutz, Andre

AU - Sundaram, Shyamala

AU - Tognolli, Michael

AU - Verbregue, Laure

AU - Veuthey, Anne Lise

AU - Zerara, Mohamed

AU - Wu, Cathy H.

AU - Arighi, Cecilia N.

AU - Arminski, Leslie

AU - Chen, Chuming

AU - Chen, Yongxing

AU - Huang, Hongzhan

AU - Kukreja, Abhishek

AU - Laiho, Kati

AU - McGarvey, Peter

AU - Natale, Darren A.

AU - Natarajan, Thanemozhi G.

AU - Roberts, Natalia V.

AU - Suzek, Baris E.

AU - Vinayaka, C. R.

AU - Wang, Qinghua

AU - Wang, Yuqi

AU - Yeh, Lai Su

AU - Yerramalla, Meher Shruti

AU - Zhang, Jian

PY - 2013/1/1

Y1 - 2013/1/1

N2 - The mission of the Universal Protein Resource (UniProt) (http://www.uniprot.org) is to support biological research by providing a freely accessible, stable, comprehensive, fully classified, richly and accurately annotated protein sequence knowledgebase. It integrates, interprets and standardizes data from numerous resources to achieve the most comprehensive catalogue of protein sequences and functional annotation. UniProt comprises four major components, each optimized for different uses, the UniProt Archive, the UniProt Knowledgebase, the UniProt Reference Clusters and the UniProt Metagenomic and Environmental Sequence Database. UniProt is produced by the UniProt Consortium, which consists of groups from the European Bioinformatics Institute (EBI), the SIB Swiss Institute of Bioinformatics (SIB) and the Protein Information Resource (PIR). UniProt is updated and distributed every 4 weeks and can be accessed online for searches or downloads.

AB - The mission of the Universal Protein Resource (UniProt) (http://www.uniprot.org) is to support biological research by providing a freely accessible, stable, comprehensive, fully classified, richly and accurately annotated protein sequence knowledgebase. It integrates, interprets and standardizes data from numerous resources to achieve the most comprehensive catalogue of protein sequences and functional annotation. UniProt comprises four major components, each optimized for different uses, the UniProt Archive, the UniProt Knowledgebase, the UniProt Reference Clusters and the UniProt Metagenomic and Environmental Sequence Database. UniProt is produced by the UniProt Consortium, which consists of groups from the European Bioinformatics Institute (EBI), the SIB Swiss Institute of Bioinformatics (SIB) and the Protein Information Resource (PIR). UniProt is updated and distributed every 4 weeks and can be accessed online for searches or downloads.

UR - http://www.scopus.com/inward/record.url?scp=84874724662&partnerID=8YFLogxK

U2 - 10.1093/nar/gks1068

DO - 10.1093/nar/gks1068

M3 - Article

C2 - 23161681

AN - SCOPUS:84874724662

SN - 0305-1048

VL - 41

JO - Nucleic Acids Research

JF - Nucleic Acids Research

IS - D1

ER -

Update on activities at the Universal Protein Resource (UniProt) in 2013

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