TY - GEN
T1 - A Population of In Silico Models to Face the Variability of Human Induced Pluripotent Stem Cell-derived Cardiomyocytes: the hERG Block Case Study
AU - Paci, Michelangelo
AU - Passini, Elisa
AU - Severi, Stefano
AU - Hyttinen, Jari
AU - Rodriguez, Blanca
PY - 2016
Y1 - 2016
N2 - Human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) are characterized by an extreme variability, which cannot be reproduced by a single in silico model. Here we present a population of hiPSC-CM models, calibrated using six different experimental datasets. By sampling the maximum conductances of 11 ionic currents, 10000 parameter sets were obtained. The experimental data-based calibration selected 1355 in silico models to be included in the final population. Such population reproduces the experimental data variability and it is used to assess the different responses to a 90% IKr block. Three different profiles emerged: models still normally beating (562), action potentials with EADs (336) and repolarization failures (457). The models still beating after 800 s since IKr block showed a mean APD90 of 723±12 ms. We observed significant differences among these three classes in the maximum conductances of ICaL, IKr, IKs, IK1, INaCa and INaK, supporting the idea that hiPSC-CM belonging to the same control population can however show dramatically different responses to an external perturbation, due to the physiological variability. This has to be taken in proper consideration in the perspective of using hiPSC-CMs for safety pharmacology assays.
AB - Human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) are characterized by an extreme variability, which cannot be reproduced by a single in silico model. Here we present a population of hiPSC-CM models, calibrated using six different experimental datasets. By sampling the maximum conductances of 11 ionic currents, 10000 parameter sets were obtained. The experimental data-based calibration selected 1355 in silico models to be included in the final population. Such population reproduces the experimental data variability and it is used to assess the different responses to a 90% IKr block. Three different profiles emerged: models still normally beating (562), action potentials with EADs (336) and repolarization failures (457). The models still beating after 800 s since IKr block showed a mean APD90 of 723±12 ms. We observed significant differences among these three classes in the maximum conductances of ICaL, IKr, IKs, IK1, INaCa and INaK, supporting the idea that hiPSC-CM belonging to the same control population can however show dramatically different responses to an external perturbation, due to the physiological variability. This has to be taken in proper consideration in the perspective of using hiPSC-CMs for safety pharmacology assays.
M3 - Conference contribution
T3 - Computing in cardiology
SP - 1189
EP - 1192
BT - Computing in Cardiology
T2 - Computing in cardiology conference
Y2 - 1 January 1900
ER -