DBComposer: An R package for integrative analysis and management of gene expression microarray data

Lingjia Kong; Kaisa Leena Aho; Kirsi Granberg; Christophe Roos; Reija Autio

doi:10.1109/GENSIPS.2013.6735944

DBComposer: An R package for integrative analysis and management of gene expression microarray data

Lingjia Kong, Kaisa Leena Aho, Kirsi Granberg, Christophe Roos, Reija Autio

Tutkimustuotos: Konferenssiartikkeli › Tieteellinen › vertaisarvioitu

Abstrakti

DBComposer is an R package with a graphical user interface (GUI) to analyze and integrate human gene expression microarray data. With DBComposer, the data can be easily annotated, preprocessed and analyzed in several ways. DBComposer can also serve as a personal expression microarray database allowing users to store multiple datasets together for later retrieval or data analysis. It takes advantage of many R packages for statistics and visualizations, and provides a flexible framework to implement custom workflows to extend the data analysis capabilities.

Alkuperäiskieli	Englanti
Otsikko	2013 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2013 - Proceedings
Sivut	92-93
Sivumäärä	2
DOI - pysyväislinkit	https://doi.org/10.1109/GENSIPS.2013.6735944
Tila	Julkaistu - 2013
OKM-julkaisutyyppi	A4 Artikkeli konferenssijulkaisussa
Tapahtuma	2013 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2013 - Houston, TX, Yhdysvallat Kesto: 17 marrask. 2013 → 19 marrask. 2013

Conference

Conference	2013 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2013
Maa/Alue	Yhdysvallat
Kaupunki	Houston, TX
Ajanjakso	17/11/13 → 19/11/13

!!ASJC Scopus subject areas

Biochemistry, Genetics and Molecular Biology (miscellaneous)
Computational Theory and Mathematics
Signal Processing
Biomedical Engineering

Pääsy asiakirjaan

10.1109/GENSIPS.2013.6735944

Muut tiedostot ja linkit

Link to publication in Scopus

Siteeraa tätä

@inproceedings{26a4c3e758924e1c9cc35a5b0978c697,

title = "DBComposer: An R package for integrative analysis and management of gene expression microarray data",

abstract = "DBComposer is an R package with a graphical user interface (GUI) to analyze and integrate human gene expression microarray data. With DBComposer, the data can be easily annotated, preprocessed and analyzed in several ways. DBComposer can also serve as a personal expression microarray database allowing users to store multiple datasets together for later retrieval or data analysis. It takes advantage of many R packages for statistics and visualizations, and provides a flexible framework to implement custom workflows to extend the data analysis capabilities.",

author = "Lingjia Kong and Aho, {Kaisa Leena} and Kirsi Granberg and Christophe Roos and Reija Autio",

year = "2013",

doi = "10.1109/GENSIPS.2013.6735944",

language = "English",

isbn = "9781479934621",

pages = "92--93",

booktitle = "2013 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2013 - Proceedings",

note = "2013 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2013 ; Conference date: 17-11-2013 Through 19-11-2013",

}

Kong, L, Aho, KL, Granberg, K, Roos, C & Autio, R 2013, DBComposer: An R package for integrative analysis and management of gene expression microarray data. julkaisussa 2013 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2013 - Proceedings., 6735944, Sivut 92-93, 2013 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2013, Houston, TX, Yhdysvallat, 17/11/13. https://doi.org/10.1109/GENSIPS.2013.6735944

TY - GEN

T1 - DBComposer

T2 - 2013 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2013

AU - Kong, Lingjia

AU - Aho, Kaisa Leena

AU - Granberg, Kirsi

AU - Roos, Christophe

AU - Autio, Reija

PY - 2013

Y1 - 2013

N2 - DBComposer is an R package with a graphical user interface (GUI) to analyze and integrate human gene expression microarray data. With DBComposer, the data can be easily annotated, preprocessed and analyzed in several ways. DBComposer can also serve as a personal expression microarray database allowing users to store multiple datasets together for later retrieval or data analysis. It takes advantage of many R packages for statistics and visualizations, and provides a flexible framework to implement custom workflows to extend the data analysis capabilities.

AB - DBComposer is an R package with a graphical user interface (GUI) to analyze and integrate human gene expression microarray data. With DBComposer, the data can be easily annotated, preprocessed and analyzed in several ways. DBComposer can also serve as a personal expression microarray database allowing users to store multiple datasets together for later retrieval or data analysis. It takes advantage of many R packages for statistics and visualizations, and provides a flexible framework to implement custom workflows to extend the data analysis capabilities.

UR - http://www.scopus.com/inward/record.url?scp=84897744701&partnerID=8YFLogxK

U2 - 10.1109/GENSIPS.2013.6735944

DO - 10.1109/GENSIPS.2013.6735944

M3 - Conference contribution

AN - SCOPUS:84897744701

SN - 9781479934621

SP - 92

EP - 93

BT - 2013 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSIPS 2013 - Proceedings

Y2 - 17 November 2013 through 19 November 2013

ER -

DBComposer: An R package for integrative analysis and management of gene expression microarray data

Abstrakti

Conference

!!ASJC Scopus subject areas

Pääsy asiakirjaan

Muut tiedostot ja linkit

Sormenjälki

Siteeraa tätä