Differential mobility spectrometry imaging for pathological applications

Anton Kontunen, Jalmari Tuominen, Markus Karjalainen, Osmo Anttalainen, Teemu Tolonen, Pekka Kumpulainen, Maiju Lepomäki, Antti Vehkaoja, Niku Oksala, Antti Roine

Tutkimustuotos: ArtikkeliTieteellinenvertaisarvioitu

6 Sitaatiot (Scopus)
26 Lataukset (Pure)

Abstrakti

Pathologic examination of clinical tissue samples is time consuming and often does not involve the comprehensive analysis of the whole specimen. Automated tissue analysis systems have potential to make the workflow of a pathologist more efficient and to support in clinical decision-making. So far, these systems have been based on application of mass spectrometry imaging (MSI). MSI provides high fidelity and the results in tissue identification are promising. However, the high cost and need for maintenance limit the adoption of MSI in the clinical setting. Thus, there is a need for new innovations in the field of pathological tissue imaging. In this study, we show that differential ion mobility spectrometry (DMS) is a viable option in tissue imaging. We demonstrate that a DMS-driven solution performs with up to 92% accuracy in differentiating between two grossly distinct animal tissues. In addition, our model is able to classify the correct tissue with 81% accuracy in an eight-class setting. The DMS-based system is a significant innovation in a field dominated by mass-spectrometry-based solutions. By developing the presented platform further, DMS technology could be a cost-effective and helpful tool for automated pathological analysis.

AlkuperäiskieliEnglanti
Artikkeli104526
Sivumäärä8
JulkaisuEXPERIMENTAL AND MOLECULAR PATHOLOGY
Vuosikerta117
DOI - pysyväislinkit
TilaJulkaistu - 1 jouluk. 2020
OKM-julkaisutyyppiA1 Alkuperäisartikkeli tieteellisessä aikakauslehdessä

Rahoitus

Anton Kontunen declares funding from the Doctoral School of Tampere University and The Finnish Foundation for Technology Promotion. Jalmari Tuominen declares funding from The Finnish Medical Foundation and Competitive State Research Financing of the Expert Responsibility area of the Tampere University Hospital and Pirkanmaa Hospital District Grants 9X040. Maiju Lepomäki declares funding from the Doctoral School of Tampere University and The Finnish Medical Foundation. Antti Vehkaoja declares funding from Academy of Finland. Niku Oksala declares funding from Competitive State Research Financing of the Expert Responsibility area of Tampere University Hospital (9s045, 151B03, 9T044, 9U042, 150618, 9V044 and 9X040, 9AA057); from Competitive funding to strengthen university research profiles funded by Academy of Finland, decision number 292477; and from Tampereen Tuberkuloosisäätiö (Tampere Tuberculosis Foundation). The study sponsors did not have any involvement in the study design; collection, analysis and interpretation of data; the writing of the manuscript; or the decision to submit the manuscript for publication

Julkaisufoorumi-taso

  • Jufo-taso 1

!!ASJC Scopus subject areas

  • Pathology and Forensic Medicine
  • Molecular Biology
  • Clinical Biochemistry

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